Merge branch 'develop' into features/JAL-2360colourSchemeApplicability

[jalview.git] / src / jalview / schemes / PurinePyrimidineColourScheme.java

diff --git a/src/jalview/schemes/PurinePyrimidineColourScheme.java b/src/jalview/schemes/PurinePyrimidineColourScheme.java
index 9c43ed1..e451135 100644 (file)
--- a/src/jalview/schemes/PurinePyrimidineColourScheme.java
+++ b/src/jalview/schemes/PurinePyrimidineColourScheme.java
@@ -20,7 +20,12 @@
  */
 package jalview.schemes;
 
-import java.awt.*;
+import jalview.datamodel.AnnotatedCollectionI;
+import jalview.datamodel.SequenceCollectionI;
+import jalview.datamodel.SequenceI;
+
+import java.awt.Color;
+import java.util.Map;
 
 /**
  * Class is based off of NucleotideColourScheme
@@ -47,6 +52,7 @@ public class PurinePyrimidineColourScheme extends ResidueColourScheme
    * @return Color from purinepyrimidineIndex in
    *         jalview.schemes.ResidueProperties
    */
+  @Override
   public Color findColour(char c)
   {
     return colors[ResidueProperties.purinepyrimidineIndex[c]];
@@ -87,4 +93,27 @@ public class PurinePyrimidineColourScheme extends ResidueColourScheme
 
     return currentColour;
   }
+
+  @Override
+  public boolean isNucleotideSpecific()
+  {
+    return true;
+  }
+
+  @Override
+  public String getSchemeName()
+  {
+    return JalviewColourScheme.PurinePyrimidine.toString();
+  }
+
+  /**
+   * Returns a new instance of this colour scheme with which the given data may
+   * be coloured
+   */
+  @Override
+  public ColourSchemeI getInstance(AnnotatedCollectionI coll,
+          Map<SequenceI, SequenceCollectionI> hrs)
+  {
+    return new PurinePyrimidineColourScheme();
+  }
 }