JAL-1065 JAL-1066 - use direct object reference rather then index into alignment
[jalview.git] / src / jalview / schemes / ResidueColourScheme.java
index 5402d75..5c0aa53 100755 (executable)
  */
 package jalview.schemes;
 
-import java.util.*;
+import jalview.analysis.AAFrequency;
+import jalview.analysis.Conservation;
+import jalview.datamodel.SequenceI;
 
-import java.awt.*;
-
-import jalview.analysis.*;
+import java.awt.Color;
+import java.util.Hashtable;
 
 /**
  * DOCUMENT ME!
@@ -82,7 +83,8 @@ public class ResidueColourScheme implements ColourSchemeI
             : colors[ResidueProperties.aaIndex[c]];
   }
 
-  public Color findColour(char c, int j)
+  @Override
+  public Color findColour(char c, int j, SequenceI seq)
   {
     Color currentColour;