Merge remote-tracking branch 'origin/Tcoffee_JAL-1065' into develop

[jalview.git] / src / jalview / schemes / ResidueColourScheme.java

diff --git a/src/jalview/schemes/ResidueColourScheme.java b/src/jalview/schemes/ResidueColourScheme.java
index bc1e92b..90833c9 100755 (executable)
--- a/src/jalview/schemes/ResidueColourScheme.java
+++ b/src/jalview/schemes/ResidueColourScheme.java
@@ -17,11 +17,13 @@
  */
 package jalview.schemes;
 
-import java.util.*;
+import jalview.analysis.AAFrequency;
+import jalview.analysis.Conservation;
+import jalview.datamodel.AnnotatedCollectionI;
+import jalview.datamodel.SequenceI;
 
-import java.awt.*;
-
-import jalview.analysis.*;
+import java.awt.Color;
+import java.util.Hashtable;
 
 /**
  * DOCUMENT ME!
@@ -82,7 +84,8 @@ public class ResidueColourScheme implements ColourSchemeI
             : colors[ResidueProperties.aaIndex[c]];
   }
 
-  public Color findColour(char c, int j)
+  @Override
+  public Color findColour(char c, int j, SequenceI seq)
   {
     Color currentColour;
 
@@ -102,6 +105,7 @@ public class ResidueColourScheme implements ColourSchemeI
 
     return currentColour;
   }
+  @Override public void alignmentChanged(AnnotatedCollectionI alignment) {};
 
   /**
    * Get the percentage threshold for this colour scheme