JAL-3851 allow multiple instances of Endpoints. Fixes to naming of IGV colour scheme

[jalview.git] / src / jalview / schemes / ResidueProperties.java

diff --git a/src/jalview/schemes/ResidueProperties.java b/src/jalview/schemes/ResidueProperties.java
index 221dcdb..75fa083 100755 (executable)
--- a/src/jalview/schemes/ResidueProperties.java
+++ b/src/jalview/schemes/ResidueProperties.java
@@ -365,6 +365,20 @@ public class ResidueProperties
       Color.white, // Gap
   };
 
+  public static final Color[] igv = {
+      new Color(0, 150, 0), // A
+      Color.blue, // C
+      new Color(209, 113, 5), // G
+      Color.red, // T
+      Color.red, // U
+      Color.white, // I (inosine)
+      Color.white, // X (xanthine)
+      Color.white, // R
+      Color.white, // Y
+      Color.white, // N
+      Color.white, // Gap
+  };
+
   // Added for PurinePyrimidineColourScheme
   public static final Color[] purinepyrimidine = { new Color(255, 131, 250), // A,
                                                                              // G,