*/
package jalview.structure;
-import jalview.datamodel.*;
+import jalview.datamodel.SequenceI;
public interface SecondaryStructureListener
{
// TODO - redefine to allow RNA mouseovers to be passed back correctly to
// listeners
- public void mouseOverSequence(SequenceI sequence, int index);
+ /**
+ * act on a mouseover event
+ *
+ * @param sequence
+ * @param index
+ * the aligned sequence position (base 0)
+ * @param position
+ * the dataset sequence position (base 1)
+ */
+ public void mouseOverSequence(SequenceI sequence, int index,
+ int position);
}