{
ds = ds.getDatasetSequence();
}
- ala_copy.remap(ds, mapping, 0, -1, 1);
+ // need to relocate annotation from pdb coordinates to local sequence
+ // -1,-1 doesn't look at pdbresnum but fails to remap sequence positions...
+
+ ala_copy.remap(ds, mapping, -1, -1, 0);
ds.addAlignmentAnnotation(ala_copy);
if (ds != sequence)
{