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JAL-4079 avoid calling Alignment.getWidth() for each pass of a loop
[jalview.git]
/
src
/
jalview
/
structures
/
models
/
AAStructureBindingModel.java
diff --git
a/src/jalview/structures/models/AAStructureBindingModel.java
b/src/jalview/structures/models/AAStructureBindingModel.java
index
906cb59
..
6ce896c
100644
(file)
--- a/
src/jalview/structures/models/AAStructureBindingModel.java
+++ b/
src/jalview/structures/models/AAStructureBindingModel.java
@@
-700,7
+700,7
@@
public abstract class AAStructureBindingModel
{
refStructure = pdbfnum;
}
- for (int r = 0; r < alignment.getWidth(); r++)
+ for (int r = 0, wid = alignment.getWidth(); r < wid; r++)
{
if (!matched.get(r))
{