BitSet matched, SuperposeData[] structures)
{
int refStructure = -1;
- String[] files = getPdbFile();
+ String[] files = getStructureFiles();
if (files == null)
{
return -1;
{
return;
}
- String[] files = getPdbFile();
+ String[] files = getStructureFiles();
SequenceRenderer sr = getSequenceRenderer(alignmentv);
return fileLoadingError != null && fileLoadingError.length() > 0;
}
- protected abstract jalview.api.FeatureRenderer getFeatureRenderer(
+ public abstract jalview.api.FeatureRenderer getFeatureRenderer(
AlignmentViewPanel alignment);
}