*/
package jalview.util;
+import jalview.datamodel.SequenceI;
+
import java.util.ArrayList;
import java.util.List;
-import jalview.datamodel.SequenceI;
-
/**
* Assorted methods for analysing or comparing sequences.
*/
private static final char GAP_DASH = '-';
- public static final String GapChars = new String(new char[]
- { GAP_SPACE, GAP_DOT, GAP_DASH });
+ public static final String GapChars = new String(new char[] { GAP_SPACE,
+ GAP_DOT, GAP_DASH });
/**
* DOCUMENT ME!
List<SequenceI> flattened = new ArrayList<SequenceI>();
for (SequenceI[] ss : seqs)
{
- for (SequenceI s : ss) {
- flattened.add(s);
+ for (SequenceI s : ss)
+ {
+ flattened.add(s);
}
}
- final SequenceI[] oneDArray = flattened.toArray(new SequenceI[flattened.size()]);
+ final SequenceI[] oneDArray = flattened.toArray(new SequenceI[flattened
+ .size()]);
return isNucleotide(oneDArray);
}
}