Revert "Merge branch 'bug/JAL-3807_jpred-with-slivka' into alpha/JAL-3066_Jalview_212...

[jalview.git] / src / jalview / util / HttpUtils.java

diff --git a/src/jalview/util/HttpUtils.java b/src/jalview/util/HttpUtils.java
index 88df587..97c84bc 100644 (file)
--- a/src/jalview/util/HttpUtils.java
+++ b/src/jalview/util/HttpUtils.java
@@ -1,5 +1,28 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.util;
 
+import java.io.BufferedInputStream;
+import java.io.File;
+import java.io.FileOutputStream;
 import java.io.IOException;
 import java.io.InputStream;
 import java.net.URL;
@@ -44,4 +67,46 @@ public class HttpUtils
     return false;
   }
 
+  /**
+   * download from given URL and return a pointer to temporary file
+   */
+  public static File fetchURLToTemp(String url) throws OutOfMemoryError,
+          IOException
+  {
+    long time = System.currentTimeMillis();
+    URL rcall = new URL(url);
+
+    InputStream is = new BufferedInputStream(rcall.openStream());
+    File outFile = null;
+    try
+    {
+      outFile = File.createTempFile("jalview", ".xml");
+      outFile.deleteOnExit();
+      if (outFile.length() == 0)
+      {
+        outFile.delete();
+        return null;
+      }
+    } catch (Exception ex)
+    {
+    }
+
+    if (outFile != null)
+    {
+      FileOutputStream fio = new FileOutputStream(outFile);
+      byte[] bb = new byte[32 * 1024];
+      int l;
+      while ((l = is.read(bb)) > 0)
+      {
+        fio.write(bb, 0, l);
+      }
+      fio.close();
+      is.close();
+      return outFile;
+    }
+    else
+    {
+      return null;
+    }
+  }
 }