Merge branch 'develop' into features/JAL-2360colourSchemeApplicability

[jalview.git] / src / jalview / viewmodel / AlignmentViewport.java

diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java
index fecccb0..0171fd1 100644 (file)
--- a/src/jalview/viewmodel/AlignmentViewport.java
+++ b/src/jalview/viewmodel/AlignmentViewport.java
@@ -642,7 +642,7 @@ public abstract class AlignmentViewport implements AlignViewportI,
           sg.cs = null;
           continue;
         }
-        sg.cs = cs.applyTo(sg, getHiddenRepSequences());
+        sg.cs = cs.getInstance(sg, getHiddenRepSequences());
         sg.setConsPercGaps(ConsPercGaps);
         if (getAbovePIDThreshold() || cs instanceof PIDColourScheme
                 || cs instanceof Blosum62ColourScheme)