public float getPixelsPerCol()
{
+ resetAlignmentDims();
return (float) width / alwidth;
}
public float getPixelsPerSeq()
{
+ resetAlignmentDims();
return (float) sequencesHeight / alheight;
}
* the alignment's hidden sequences
* @param hiddenCols
* the alignment's hidden columns
- * @param ranges
- * the alignment's width and height ranges
*/
public abstract void updateViewportFromMouse(int mousex, int mousey,
- HiddenSequences hiddenSeqs, HiddenColumns hiddenCols,
- ViewportRanges ranges);
+ HiddenSequences hiddenSeqs, HiddenColumns hiddenCols);
/**
* Set the overview panel's box position to match the viewport
* the alignment's hidden sequences
* @param hiddenCols
* the alignment's hidden columns
- * @param ranges
- * the alignment's width and height ranges
*/
public abstract void setBoxPosition(HiddenSequences hiddenSeqs,
- HiddenColumns hiddenCols, ViewportRanges ranges);
+ HiddenColumns hiddenCols);
/**
* Get the collection of columns used by this overview dimensions object
*
- * @param ranges
- * the alignment's width and height ranges
* @param hiddenCols
* the alignment's hidden columns
* @return a column collection
*/
public abstract AlignmentColsCollectionI getColumns(
- ViewportRanges ranges, HiddenColumns hiddenCols);
+ HiddenColumns hiddenCols);
/**
* Get the collection of rows used by this overview dimensions object
*
- * @param ranges
- * the alignment's width and height ranges
* @param al
* the alignment
* @return a row collection
*/
- public abstract AlignmentRowsCollectionI getRows(
- ViewportRanges ranges, AlignmentI al);
+ public abstract AlignmentRowsCollectionI getRows(AlignmentI al);
+
+ /**
+ * Updates overview dimensions to account for current alignment dimensions
+ */
+ protected abstract void resetAlignmentDims();
}
\ No newline at end of file