*/
package jalview.viewmodel;
-import jalview.datamodel.AlignmentColsCollection;
+import jalview.api.AlignmentColsCollectionI;
+import jalview.api.AlignmentRowsCollectionI;
import jalview.datamodel.AlignmentI;
-import jalview.datamodel.AlignmentRowsCollection;
-import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.AllColsCollection;
+import jalview.datamodel.AllRowsCollection;
+import jalview.datamodel.HiddenColumns;
import jalview.datamodel.HiddenSequences;
public class OverviewDimensionsWithHidden extends OverviewDimensions
{
- private float pixelsPerCol;
-
- private float pixelsPerSeq;
-
/**
* Create an OverviewDimensions object
*
{
super(ranges, showAnnotationPanel);
- int alwidth = ranges.getAbsoluteAlignmentWidth();
- int alheight = ranges.getAbsoluteAlignmentHeight();
-
- pixelsPerCol = (float) width / alwidth;
- pixelsPerSeq = (float) sequencesHeight / alheight;
+ alwidth = ranges.getAbsoluteAlignmentWidth();
+ alheight = ranges.getAbsoluteAlignmentHeight();
}
/**
*/
@Override
public void updateViewportFromMouse(int mousex, int mousey,
- HiddenSequences hiddenSeqs, ColumnSelection hiddenCols,
+ HiddenSequences hiddenSeqs, HiddenColumns hiddenCols,
ViewportRanges ranges)
{
int x = mousex;
int y = mousey;
- int alwidth = ranges.getAbsoluteAlignmentWidth();
- int alheight = ranges.getAbsoluteAlignmentHeight();
+ alwidth = ranges.getAbsoluteAlignmentWidth();
+ alheight = ranges.getAbsoluteAlignmentHeight();
if (x < 0)
{
*/
@Override
public void setBoxPosition(HiddenSequences hiddenSeqs,
- ColumnSelection hiddenCols, ViewportRanges ranges)
+ HiddenColumns hiddenCols, ViewportRanges ranges)
{
- int alwidth = ranges.getAbsoluteAlignmentWidth();
- int alheight = ranges.getAbsoluteAlignmentHeight();
+ alwidth = ranges.getAbsoluteAlignmentWidth();
+ alheight = ranges.getAbsoluteAlignmentHeight();
// work with absolute values of startRes and endRes
int startRes = hiddenCols.adjustForHiddenColumns(ranges.getStartRes());
}
@Override
- public AlignmentColsCollection getColumns(ViewportRanges ranges,
- ColumnSelection hiddenCols)
+ public AlignmentColsCollectionI getColumns(ViewportRanges ranges,
+ HiddenColumns hiddenCols)
{
- return new AlignmentColsCollection(0,
+ return new AllColsCollection(0,
ranges.getAbsoluteAlignmentWidth() - 1,
hiddenCols);
}
@Override
- public AlignmentRowsCollection getRows(ViewportRanges ranges,
+ public AlignmentRowsCollectionI getRows(ViewportRanges ranges,
AlignmentI al)
{
- return new AlignmentRowsCollection(0,
+ return new AllRowsCollection(0,
ranges.getAbsoluteAlignmentHeight() - 1,
al);
}
-
- @Override
- public float getPixelsPerCol()
- {
- return pixelsPerCol;
- }
-
- @Override
- public float getPixelsPerSeq()
- {
- return pixelsPerSeq;
- }
}