* @param af
* @param counter
*/
- public AnnotationWorker(AlignViewportI viewport,
- AlignmentViewPanel panel, AnnotationProviderI counter)
+ public AnnotationWorker(AlignViewportI viewport, AlignmentViewPanel panel,
+ AnnotationProviderI counter)
{
super(viewport, panel);
- ourAnnots = new ArrayList<AlignmentAnnotation>();
+ ourAnnots = new ArrayList<>();
this.counter = counter;
calcMan.registerWorker(this);
}
if (ap != null)
{
ap.adjustAnnotationHeight();
- ap.paintAlignment(true);
+ // TODO: only need to update colour and geometry if panel height changes
+ // and view is coloured by annotation, and the annotation is actually
+ // changed!
+ ap.paintAlignment(true, true);
}
}