*/
package jalview.ws;
-import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.datamodel.AlignedCodonFrame;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentI;
throw (new Exception(
"Timed out when communicating with server\nTry again later.\n"));
}
- jalview.bin.Cache.log.debug("Job " + j + " Result state "
+ Console.debug("Job " + j + " Result state "
+ jobs[j].getState() + "(ServerError="
+ jobs[j].isServerError() + ")");
} catch (Exception ex)
{
// Deal with Transaction exceptions
wsInfo.appendProgressText(jobs[j].jobnum, MessageManager
- .formatMessage("info.server_exception", new Object[] {
- WebServiceName, ex.getMessage() }));
+ .formatMessage("info.server_exception", new Object[]
+ { WebServiceName, ex.getMessage() }));
// always output the exception's stack trace to the log
- Cache.log.warn(WebServiceName + " job(" + jobs[j].jobnum
+ Console.warn(WebServiceName + " job(" + jobs[j].jobnum
+ ") Server exception.");
// todo: could limit trace to cause if this is a SOAPFaultException.
ex.printStackTrace();
if (jobs[j].allowedServerExceptions > 0)
{
jobs[j].allowedServerExceptions--;
- Cache.log.debug("Sleeping after a server exception.");
+ Console.debug("Sleeping after a server exception.");
try
{
Thread.sleep(5000);
}
else
{
- Cache.log.warn("Dropping job " + j + " " + jobs[j].jobId);
+ Console.warn("Dropping job " + j + " " + jobs[j].jobId);
jobs[j].subjobComplete = true;
wsInfo.setStatus(jobs[j].jobnum,
WebserviceInfo.STATE_STOPPED_SERVERERROR);
jobs[j].clearResponse(); // may contain out of date result data
wsInfo.setStatus(jobs[j].jobnum,
WebserviceInfo.STATE_STOPPED_ERROR);
- Cache.log.error("Out of memory when retrieving Job " + j
+ Console.error("Out of memory when retrieving Job " + j
+ " id:" + WsUrl + "/" + jobs[j].jobId, er);
- new jalview.gui.OOMWarning("retrieving result for "
- + WebServiceName, er);
+ new jalview.gui.OOMWarning(
+ "retrieving result for " + WebServiceName, er);
System.gc();
}
}
Thread.sleep(5000);
} catch (InterruptedException e)
{
- Cache.log
- .debug("Interrupted sleep waiting for next job poll.", e);
+ Console.debug("Interrupted sleep waiting for next job poll.",
+ e);
}
// System.out.println("I'm alive "+alTitle);
}
}
else
{
- Cache.log
- .debug("WebServiceJob poll loop finished with no jobs created.");
+ Console.debug(
+ "WebServiceJob poll loop finished with no jobs created.");
wsInfo.setStatus(WebserviceInfo.STATE_STOPPED_ERROR);
- wsInfo.appendProgressText(MessageManager
- .getString("info.no_jobs_ran"));
+ wsInfo.appendProgressText(
+ MessageManager.getString("info.no_jobs_ran"));
wsInfo.setFinishedNoResults();
}
}