import jalview.bin.*;
import jalview.datamodel.*;
import jalview.datamodel.Alignment;
-import jalview.datamodel.Sequence;
import jalview.gui.*;
import vamsas.objects.simple.MsaResult;
if (nw > sw)
{
// pad at end
- alseqs[i].setSequence(t_alseqs[i].getSequence() +
+ alseqs[i].setSequence(t_alseqs[i].getSequenceAsString() +
insbuff.substring(0, sw - nw));
}
}