JAL-3858 persist PAE matrix (only so far) as serialised floats in element on dataset...

[jalview.git] / src / jalview / ws / datamodel / alphafold / PAEContactMatrix.java

diff --git a/src/jalview/ws/datamodel/alphafold/PAEContactMatrix.java b/src/jalview/ws/datamodel/alphafold/PAEContactMatrix.java
index 58a4a83..92d27a0 100644 (file)
--- a/src/jalview/ws/datamodel/alphafold/PAEContactMatrix.java
+++ b/src/jalview/ws/datamodel/alphafold/PAEContactMatrix.java
@@ -78,6 +78,7 @@ public class PAEContactMatrix implements ContactMatrixI
       }
     }
     maxrow=matrix.length;
+    elements = matrix;
     
   }
 
@@ -167,7 +168,7 @@ public class PAEContactMatrix implements ContactMatrixI
       @Override
       public int getContactHeight()
       {
-        return maxcol - 1;
+        return maxcol-1;
       }
 
       @Override
@@ -224,4 +225,14 @@ public class PAEContactMatrix implements ContactMatrixI
   {
     return PAEMATRIX;
   }
+  @Override
+  public int getWidth()
+  {
+    return length;
+  }
+  @Override
+  public int getHeight()
+  {
+    return length;
+  }
 }