"(UNIPROT\\|?|UNIPROT_|UNIREF\\d+_|UNIREF\\d+\\|?)", "");
AlignmentI al = null;
- String downloadstring = getDomain() + "/uniprot/" + queries + ".xml";
+ String downloadstring = getDomain() + "/uniprotkb/" + queries + ".xml";
URL url = new URL(downloadstring);
HttpURLConnection urlconn = (HttpURLConnection) url.openConnection();