JAL-2461 Removed DAS error stack trace, updated message

[jalview.git] / src / jalview / ws / dbsources / das / datamodel / DasSourceRegistry.java

diff --git a/src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java b/src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java
index 98140d7..e0f7f70 100644 (file)
--- a/src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java
+++ b/src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java
@@ -1,23 +1,29 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.dbsources.das.datamodel;
 
+import jalview.bin.Cache;
+import jalview.ws.dbsources.das.api.DasSourceRegistryI;
+import jalview.ws.dbsources.das.api.jalviewSourceI;
+
 import java.net.HttpURLConnection;
 import java.net.MalformedURLException;
 import java.net.URL;
@@ -37,10 +43,6 @@ import org.biodas.jdas.schema.sources.SOURCE;
 import org.biodas.jdas.schema.sources.SOURCES;
 import org.biodas.jdas.schema.sources.VERSION;
 
-import jalview.bin.Cache;
-import jalview.ws.dbsources.das.api.DasSourceRegistryI;
-import jalview.ws.dbsources.das.api.jalviewSourceI;
-
 /**
  *
  */
@@ -54,7 +56,8 @@ public class DasSourceRegistry implements DasSourceRegistryI,
 
   private Hashtable<String, jalviewSourceI> localSources = null;
 
-  public static String DEFAULT_REGISTRY = "http://www.dasregistry.org/das/";
+  // public static String DEFAULT_REGISTRY = "http://www.dasregistry.org/das/";
+  public static String DEFAULT_REGISTRY = "http://www.ebi.ac.uk/das-srv/registry/das/";
 
   /**
    * true if thread is running and we are talking to DAS registry service
@@ -66,6 +69,7 @@ public class DasSourceRegistry implements DasSourceRegistryI,
     return loadingDasSources;
   }
 
+  @Override
   public String getDasRegistryURL()
   {
     String registry = jalview.bin.Cache.getDefault("DAS_REGISTRY_URL",
@@ -147,9 +151,8 @@ public class DasSourceRegistry implements DasSourceRegistryI,
       return dsrc;
     } catch (Exception ex)
     {
-      System.err.println("Failed to contact DAS1 registry at "
-              + registryURL);
-      ex.printStackTrace();
+      System.out.println("DAS1 registry at " + registryURL
+              + " no longer exists");
       return new ArrayList<jalviewSourceI>();
     }
   }
@@ -256,8 +259,8 @@ public class DasSourceRegistry implements DasSourceRegistryI,
   }
 
   /*
- * 
- */
+  * 
+  */
 
   @Override
   public jalviewSourceI createLocalSource(String url, String name,