/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
*
*/
package jalview.ws.jws2;
-import jalview.ws.jws2.Jws2Discoverer.Jws2Instance;
+import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.ws.params.ArgumentI;
import jalview.ws.params.WsParamSetI;
import compbio.metadata.Preset;
-public class JabaPreset implements WsParamSetI {
- Preset p=null;
+public class JabaPreset implements WsParamSetI
+{
+ Preset p = null;
+
Jws2Instance service;
- public JabaPreset(Jws2Instance svc, Preset preset) {
- service=svc;
- p=preset;
+
+ public JabaPreset(Jws2Instance svc, Preset preset)
+ {
+ service = svc;
+ p = preset;
}
+
@Override
public String getName()
{
return p.getName();
}
+
@Override
public String getDescription()
{
return p.getDescription();
}
+
@Override
public String[] getApplicableUrls()
{
- return new String[] { service.getUri()};
+ return new String[]
+ { service.getUri() };
}
+
@Override
public String getSourceFile()
{
return null;
}
+
@Override
public boolean isModifiable()
{
return false;
}
+
@Override
public void setSourceFile(String newfile)
{
- throw new Error("Cannot set source file for "+getClass());
+ throw new Error("Cannot set source file for " + getClass());
}
+
@Override
public List<ArgumentI> getArguments()
{
- try {
- return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service.getRunnerConfig()));
- }
- catch (Exception e)
+ try
+ {
+ return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service
+ .getRunnerConfig()));
+ } catch (Exception e)
{
e.printStackTrace();
- throw new Error("Probable mismatch between service instance and preset!");
+ throw new Error(
+ "Probable mismatch between service instance and preset!");
}
}
+
@Override
public void setArguments(List<ArgumentI> args)
{
- throw new Error("Cannot set Parameters for a Jaba Web service's preset");
+ throw new Error("Cannot set Parameters for a Jaba Web service's preset");
}
}