import javax.swing.JMenu;
import javax.swing.JMenuItem;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
import org.apache.log4j.Level;
import jalview.datamodel.AlignmentView;
import jalview.gui.AlignFrame;
import jalview.ws.WSMenuEntryProviderI;
+import jalview.ws.params.ParamDatastoreI;
import compbio.data.msa.MsaWS;
import compbio.metadata.Option;
import compbio.metadata.Preset;
PresetManager presets = null;
+ public JabaParamStore paramStore=null;
+
/**
* non thread safe - gets the presets for this service (blocks whilst it
* calls the service to get the preset set)
}
super.finalize();
}
+
+ public ParamDatastoreI getParamStore()
+ {
+ if (paramStore == null)
+ {
+ try {
+ paramStore = new JabaParamStore(this);
+ } catch (Exception ex)
+ {}
+
+ }
+ return paramStore;
+ }
};
/**
public void attachWSMenuEntry(JMenu wsmenu, final AlignFrame alignFrame)
{
+ // dynamically regenerate service list.
+ final JMenu jws2al = new JMenu("JABA Alignment");
+ jws2al.addMenuListener(new MenuListener() {
+ // TODO: future: add menu listener to parent menu - so submenus are populated *before* they are selected.
+ @Override
+ public void menuSelected(MenuEvent e)
+ {
+ populateWSMenuEntry(jws2al, alignFrame);
+ }
+
+ @Override
+ public void menuDeselected(MenuEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ @Override
+ public void menuCanceled(MenuEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ });
+ wsmenu.add(jws2al);
+ }
+ private void populateWSMenuEntry(JMenu jws2al, final AlignFrame alignFrame)
+ {
if (running || services == null || services.size() == 0)
{
return;
* eventually, JWS2 services will appear under the same align/etc submenus.
* for moment we keep them separate.
*/
- JMenu atpoint, jws2al = new JMenu("JABA Alignment");
+ JMenu atpoint;
MsaWSClient msacl = new MsaWSClient();
Vector hostLabels = new Vector();
+ jws2al.removeAll();
for (final Jws2Instance service : services)
{
atpoint = jws2al;
* alignFrame); } });
*/
}
- if (services.size() > 0)
- {
- wsmenu.add(jws2al);
- }
-
}
public static void main(String[] args)