*/
package jalview.ws.jws2;
+import java.util.Locale;
+
import jalview.api.AlignCalcWorkerI;
-import jalview.bin.Cache;
import jalview.gui.AlignFrame;
import jalview.gui.Desktop;
import jalview.gui.JvSwingUtils;
import java.awt.event.ActionListener;
import java.util.List;
-import javax.swing.JCheckBoxMenuItem;
import javax.swing.JMenu;
import javax.swing.JMenuItem;
-import javax.swing.JOptionPane;
-import javax.swing.event.MenuEvent;
-import javax.swing.event.MenuListener;
/**
* @author jprocter
// dan changed! dan test. comment out if conditional
// if (alignFrame.getViewport().getAlignment().isNucleotide())
// {
- // JOptionPane.showMessageDialog(Desktop.desktop, sh.serviceType
+ // JvOptionPane.showMessageDialog(Desktop.desktop, sh.serviceType
// + " can only be used\nfor amino acid alignments.",
- // "Wrong type of sequences!", JOptionPane.WARNING_MESSAGE);
+ // "Wrong type of sequences!", JvOptionPane.WARNING_MESSAGE);
// return;
//
// }
{
worker = (AbstractJabaCalcWorker) (clientClass
.getConstructor(new Class[]
- { Jws2Instance.class, AlignFrame.class,
- WsParamSetI.class, List.class })
+ { Jws2Instance.class, AlignFrame.class, WsParamSetI.class,
+ List.class })
.newInstance(new Object[]
{ sh, alignFrame, this.preset, paramset }));
} catch (Exception x)
{
x.printStackTrace();
- throw new Error(MessageManager.getString("error.implementation_error"), x);
+ throw new Error(
+ MessageManager.getString("error.implementation_error"),
+ x);
}
alignFrame.getViewport().getCalcManager().registerWorker(worker);
alignFrame.getViewport().getCalcManager().startWorker(worker);
}
// reinstate worker if it was blacklisted (might have happened due to
// invalid parameters)
- alignFrame.getViewport().getCalcManager().workerMayRun(worker);
+ alignFrame.getViewport().getCalcManager().enableWorker(worker);
worker.updateParameters(this.preset, paramset);
}
}
- if (sh.action.toLowerCase().contains("disorder"))
+ if (sh.action.toLowerCase(Locale.ROOT).contains("disorder"))
{
// build IUPred style client. take sequences, returns annotation per
// sequence.
return;
}
- alignFrame
- .getViewport()
- .getCalcManager()
- .startWorker(
- new AADisorderClient(sh, alignFrame, preset, paramset));
+ alignFrame.getViewport().getCalcManager().startWorker(
+ new AADisorderClient(sh, alignFrame, preset, paramset));
}
}
// arguments
annotservice = new JMenuItem(
MessageManager.getString("label.edit_settings_and_run"));
- annotservice
- .setToolTipText(MessageManager
- .getString("label.view_and_change_parameters_before_running_calculation"));
+ annotservice.setToolTipText(MessageManager.getString(
+ "label.view_and_change_parameters_before_running_calculation"));
annotservice.addActionListener(new ActionListener()
{
List<WsParamSetI> presets = service.getParamStore().getPresets();
if (presets != null && presets.size() > 0)
{
- JMenu presetlist = new JMenu(MessageManager.formatMessage("label.run_with_preset", new String[]{calcName}));
+ JMenu presetlist = new JMenu(MessageManager
+ .formatMessage("label.run_with_preset", new String[]
+ { calcName }));
for (final WsParamSetI preset : presets)
{
final JMenuItem methodR = new JMenuItem(preset.getName());
methodR.setToolTipText(JvSwingUtils.wrapTooltip(true, "<strong>"
- + (preset.isModifiable() ? MessageManager.getString("label.user_preset")
- : MessageManager.getString("label.service_preset")) + "</strong><br/>"
- + preset.getDescription()));
+ + (preset.isModifiable()
+ ? MessageManager.getString("label.user_preset")
+ : MessageManager
+ .getString("label.service_preset"))
+ + "</strong><br/>" + preset.getDescription()));
methodR.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
Desktop.instance.showUrl(service.docUrl);
}
});
- annotservice.setToolTipText(JvSwingUtils.wrapTooltip(true, MessageManager.formatMessage("label.view_service_doc_url", new String[]{service.docUrl,service.docUrl})));
+ annotservice.setToolTipText(
+ JvSwingUtils.wrapTooltip(true, MessageManager.formatMessage(
+ "label.view_service_doc_url", new String[]
+ { service.docUrl, service.docUrl })));
wsmenu.add(annotservice);
}
}