import jalview.datamodel.SequenceI;
+import jalview.io.packed.DataProvider;
+import jalview.io.packed.SimpleDataProvider;
+import jalview.io.packed.DataProvider.JvDataType;
import jalview.util.GroupUrlLink.UrlStringTooLongException;
import jalview.util.Platform;
import jalview.ws.rest.params.Alignment;
import jalview.ws.rest.params.AnnotationFile;
import jalview.ws.rest.params.SeqGroupIndexVector;
+import java.util.ArrayList;
import java.util.HashMap;
import java.util.Hashtable;
+import java.util.List;
import java.util.Map;
*/
String urlSuffix;
- /***
- * modelling the io:
- * validation of input
- * { formatter for type, parser for type }
- *
- */
/** input info given as key/value pairs - mapped to post arguments
*/
Map<String,InputType> inputParams=new HashMap();
/**
+ * assigns the given inputType it to its corresponding input parameter token it.token
+ * @param it
+ */
+ public void setInputParam(InputType it)
+ {
+ inputParams.put(it.token, it);
+ }
+ /**
+ * remove the given input type it from the set of service input parameters.
+ * @param it
+ */
+ public void removeInputParam(InputType it)
+ {
+ inputParams.remove(it.token);
+ }
+ /**
* service requests alignment data
*/
boolean aligndata;
// TODO: correctly write ?/& appropriate to result URL format.
return jobId+urlSuffix;
}
+ private List<JvDataType> resultData;
+ public void addResultDatatype(JvDataType dt)
+ {
+ if (resultData==null)
+ {
+ resultData = new ArrayList<JvDataType>();
+ }
+ resultData.add(dt);
+ }
+ public boolean removeRsultDatatype(JvDataType dt)
+ {
+ if (resultData!=null)
+ {
+ return resultData.remove(dt);
+ }
+ return false;
+ }
+ public List<JvDataType> getResultDataTypes()
+ {
+ return resultData;
+ }
}