JAL-4281 store/restore ID width and manual adjustment flag in Jalview projects

[jalview.git] / src / jalview / xml / binding / jalview / AnnotationElement.java

diff --git a/src/jalview/xml/binding/jalview/AnnotationElement.java b/src/jalview/xml/binding/jalview/AnnotationElement.java
index 087667a..9f9707e 100644 (file)
--- a/src/jalview/xml/binding/jalview/AnnotationElement.java
+++ b/src/jalview/xml/binding/jalview/AnnotationElement.java
@@ -1,10 +1,11 @@
 //
-// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
-// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
+// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 
+// See https://eclipse-ee4j.github.io/jaxb-ri 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2023.05.13 at 06:58:41 PM BST 
+// Generated on: 2023.09.08 at 03:55:49 PM BST 
 //
 
+
 package jalview.xml.binding.jalview;
 
 import javax.xml.bind.annotation.XmlAccessType;
@@ -13,193 +14,190 @@ import javax.xml.bind.annotation.XmlAttribute;
 import javax.xml.bind.annotation.XmlRootElement;
 import javax.xml.bind.annotation.XmlType;
 
+
 /**
- * <p>
- * Java class for anonymous complex type.
+ * &lt;p&gt;Java class for anonymous complex type.
  * 
- * <p>
- * The following schema fragment specifies the expected content contained within
- * this class.
+ * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
  * 
- * <pre>
- * &lt;complexType>
- *   &lt;complexContent>
- *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
- *       &lt;sequence>
- *         &lt;element name="displayCharacter" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/>
- *         &lt;element name="description" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/>
- *         &lt;element name="secondaryStructure" minOccurs="0">
- *           &lt;simpleType>
- *             &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string">
- *               &lt;length value="1"/>
- *             &lt;/restriction>
- *           &lt;/simpleType>
- *         &lt;/element>
- *         &lt;element name="value" type="{http://www.w3.org/2001/XMLSchema}float" minOccurs="0"/>
- *       &lt;/sequence>
- *       &lt;attribute name="position" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
- *       &lt;attribute name="colour" type="{http://www.w3.org/2001/XMLSchema}int" />
- *     &lt;/restriction>
- *   &lt;/complexContent>
- * &lt;/complexType>
- * </pre>
+ * &lt;pre&gt;
+ * &amp;lt;complexType&amp;gt;
+ *   &amp;lt;complexContent&amp;gt;
+ *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
+ *       &amp;lt;sequence&amp;gt;
+ *         &amp;lt;element name="displayCharacter" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/&amp;gt;
+ *         &amp;lt;element name="description" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/&amp;gt;
+ *         &amp;lt;element name="secondaryStructure" minOccurs="0"&amp;gt;
+ *           &amp;lt;simpleType&amp;gt;
+ *             &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&amp;gt;
+ *               &amp;lt;length value="1"/&amp;gt;
+ *             &amp;lt;/restriction&amp;gt;
+ *           &amp;lt;/simpleType&amp;gt;
+ *         &amp;lt;/element&amp;gt;
+ *         &amp;lt;element name="value" type="{http://www.w3.org/2001/XMLSchema}float" minOccurs="0"/&amp;gt;
+ *       &amp;lt;/sequence&amp;gt;
+ *       &amp;lt;attribute name="position" use="required" type="{http://www.w3.org/2001/XMLSchema}int" /&amp;gt;
+ *       &amp;lt;attribute name="colour" type="{http://www.w3.org/2001/XMLSchema}int" /&amp;gt;
+ *     &amp;lt;/restriction&amp;gt;
+ *   &amp;lt;/complexContent&amp;gt;
+ * &amp;lt;/complexType&amp;gt;
+ * &lt;/pre&gt;
  * 
  * 
  */
 @XmlAccessorType(XmlAccessType.FIELD)
-@XmlType(
-  name = "",
-  propOrder =
-  { "displayCharacter", "description", "secondaryStructure", "value" })
+@XmlType(name = "", propOrder = {
+    "displayCharacter",
+    "description",
+    "secondaryStructure",
+    "value"
+})
 @XmlRootElement(name = "annotationElement")
-public class AnnotationElement
-{
-
-  protected String displayCharacter;
-
-  protected String description;
-
-  protected String secondaryStructure;
-
-  protected Float value;
-
-  @XmlAttribute(name = "position", required = true)
-  protected int position;
-
-  @XmlAttribute(name = "colour")
-  protected Integer colour;
-
-  /**
-   * Gets the value of the displayCharacter property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getDisplayCharacter()
-  {
-    return displayCharacter;
-  }
-
-  /**
-   * Sets the value of the displayCharacter property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setDisplayCharacter(String value)
-  {
-    this.displayCharacter = value;
-  }
-
-  /**
-   * Gets the value of the description property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getDescription()
-  {
-    return description;
-  }
-
-  /**
-   * Sets the value of the description property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setDescription(String value)
-  {
-    this.description = value;
-  }
-
-  /**
-   * Gets the value of the secondaryStructure property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getSecondaryStructure()
-  {
-    return secondaryStructure;
-  }
-
-  /**
-   * Sets the value of the secondaryStructure property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setSecondaryStructure(String value)
-  {
-    this.secondaryStructure = value;
-  }
-
-  /**
-   * Gets the value of the value property.
-   * 
-   * @return possible object is {@link Float }
-   * 
-   */
-  public Float getValue()
-  {
-    return value;
-  }
-
-  /**
-   * Sets the value of the value property.
-   * 
-   * @param value
-   *          allowed object is {@link Float }
-   * 
-   */
-  public void setValue(Float value)
-  {
-    this.value = value;
-  }
-
-  /**
-   * Gets the value of the position property.
-   * 
-   */
-  public int getPosition()
-  {
-    return position;
-  }
-
-  /**
-   * Sets the value of the position property.
-   * 
-   */
-  public void setPosition(int value)
-  {
-    this.position = value;
-  }
-
-  /**
-   * Gets the value of the colour property.
-   * 
-   * @return possible object is {@link Integer }
-   * 
-   */
-  public Integer getColour()
-  {
-    return colour;
-  }
-
-  /**
-   * Sets the value of the colour property.
-   * 
-   * @param value
-   *          allowed object is {@link Integer }
-   * 
-   */
-  public void setColour(Integer value)
-  {
-    this.colour = value;
-  }
+public class AnnotationElement {
+
+    protected String displayCharacter;
+    protected String description;
+    protected String secondaryStructure;
+    protected Float value;
+    @XmlAttribute(name = "position", required = true)
+    protected int position;
+    @XmlAttribute(name = "colour")
+    protected Integer colour;
+
+    /**
+     * Gets the value of the displayCharacter property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getDisplayCharacter() {
+        return displayCharacter;
+    }
+
+    /**
+     * Sets the value of the displayCharacter property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setDisplayCharacter(String value) {
+        this.displayCharacter = value;
+    }
+
+    /**
+     * Gets the value of the description property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getDescription() {
+        return description;
+    }
+
+    /**
+     * Sets the value of the description property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setDescription(String value) {
+        this.description = value;
+    }
+
+    /**
+     * Gets the value of the secondaryStructure property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getSecondaryStructure() {
+        return secondaryStructure;
+    }
+
+    /**
+     * Sets the value of the secondaryStructure property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setSecondaryStructure(String value) {
+        this.secondaryStructure = value;
+    }
+
+    /**
+     * Gets the value of the value property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link Float }
+     *     
+     */
+    public Float getValue() {
+        return value;
+    }
+
+    /**
+     * Sets the value of the value property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link Float }
+     *     
+     */
+    public void setValue(Float value) {
+        this.value = value;
+    }
+
+    /**
+     * Gets the value of the position property.
+     * 
+     */
+    public int getPosition() {
+        return position;
+    }
+
+    /**
+     * Sets the value of the position property.
+     * 
+     */
+    public void setPosition(int value) {
+        this.position = value;
+    }
+
+    /**
+     * Gets the value of the colour property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link Integer }
+     *     
+     */
+    public Integer getColour() {
+        return colour;
+    }
+
+    /**
+     * Sets the value of the colour property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link Integer }
+     *     
+     */
+    public void setColour(Integer value) {
+        this.colour = value;
+    }
 
 }