//
-// This file was generated by the Eclipse Implementation of JAXB, v2.3.3
-// See https://eclipse-ee4j.github.io/jaxb-ri
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2022.02.07 at 04:44:21 PM GMT
+// Generated on: 2023.05.13 at 06:58:42 PM BST
//
-
package jalview.xml.binding.uniprot;
import java.util.ArrayList;
import javax.xml.bind.annotation.XmlElement;
import javax.xml.bind.annotation.XmlType;
-
/**
* Describes the source organism.
*
- * <p>Java class for organismType complex type.
+ * <p>
+ * Java class for organismType complex type.
*
- * <p>The following schema fragment specifies the expected content contained within this class.
+ * <p>
+ * The following schema fragment specifies the expected content contained within
+ * this class.
*
- * <pre>
- * &lt;complexType name="organismType"&gt;
- * &lt;complexContent&gt;
- * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
- * &lt;sequence&gt;
- * &lt;element name="name" type="{http://uniprot.org/uniprot}organismNameType" maxOccurs="unbounded"/&gt;
- * &lt;element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType" maxOccurs="unbounded"/&gt;
- * &lt;element name="lineage" minOccurs="0"&gt;
- * &lt;complexType&gt;
- * &lt;complexContent&gt;
- * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
- * &lt;sequence&gt;
- * &lt;element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/&gt;
- * &lt;/sequence&gt;
- * &lt;/restriction&gt;
- * &lt;/complexContent&gt;
- * &lt;/complexType&gt;
- * &lt;/element&gt;
- * &lt;/sequence&gt;
- * &lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /&gt;
- * &lt;/restriction&gt;
- * &lt;/complexContent&gt;
- * &lt;/complexType&gt;
- * </pre>
+ * <pre>
+ * <complexType name="organismType">
+ * <complexContent>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ * <sequence>
+ * <element name="name" type="{http://uniprot.org/uniprot}organismNameType" maxOccurs="unbounded"/>
+ * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType" maxOccurs="unbounded"/>
+ * <element name="lineage" minOccurs="0">
+ * <complexType>
+ * <complexContent>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ * <sequence>
+ * <element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/>
+ * </sequence>
+ * </restriction>
+ * </complexContent>
+ * </complexType>
+ * </element>
+ * </sequence>
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </restriction>
+ * </complexContent>
+ * </complexType>
+ * </pre>
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
-@XmlType(name = "organismType", propOrder = {
- "name",
- "dbReference",
- "lineage"
-})
-public class OrganismType {
-
- @XmlElement(required = true)
- protected List<OrganismNameType> name;
- @XmlElement(required = true)
- protected List<DbReferenceType> dbReference;
- protected OrganismType.Lineage lineage;
- @XmlAttribute(name = "evidence")
- protected List<Integer> evidence;
-
- /**
- * Gets the value of the name property.
- *
- * <p>
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a <CODE>set</CODE> method for the name property.
- *
- * <p>
- * For example, to add a new item, do as follows:
- * <pre>
- * getName().add(newItem);
- * </pre>
- *
- *
- * <p>
- * Objects of the following type(s) are allowed in the list
- * {@link OrganismNameType }
- *
- *
- */
- public List<OrganismNameType> getName() {
- if (name == null) {
- name = new ArrayList<OrganismNameType>();
- }
- return this.name;
+@XmlType(
+ name = "organismType",
+ propOrder =
+ { "name", "dbReference", "lineage" })
+public class OrganismType
+{
+
+ @XmlElement(required = true)
+ protected List<OrganismNameType> name;
+
+ @XmlElement(required = true)
+ protected List<DbReferenceType> dbReference;
+
+ protected OrganismType.Lineage lineage;
+
+ @XmlAttribute(name = "evidence")
+ protected List<Integer> evidence;
+
+ /**
+ * Gets the value of the name property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list, not a snapshot.
+ * Therefore any modification you make to the returned list will be present
+ * inside the JAXB object. This is why there is not a <CODE>set</CODE> method
+ * for the name property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ *
+ * <pre>
+ * getName().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link OrganismNameType }
+ *
+ *
+ */
+ public List<OrganismNameType> getName()
+ {
+ if (name == null)
+ {
+ name = new ArrayList<OrganismNameType>();
}
-
- /**
- * Gets the value of the dbReference property.
- *
- * <p>
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a <CODE>set</CODE> method for the dbReference property.
- *
- * <p>
- * For example, to add a new item, do as follows:
- * <pre>
- * getDbReference().add(newItem);
- * </pre>
- *
- *
- * <p>
- * Objects of the following type(s) are allowed in the list
- * {@link DbReferenceType }
- *
- *
- */
- public List<DbReferenceType> getDbReference() {
- if (dbReference == null) {
- dbReference = new ArrayList<DbReferenceType>();
- }
- return this.dbReference;
+ return this.name;
+ }
+
+ /**
+ * Gets the value of the dbReference property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list, not a snapshot.
+ * Therefore any modification you make to the returned list will be present
+ * inside the JAXB object. This is why there is not a <CODE>set</CODE> method
+ * for the dbReference property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ *
+ * <pre>
+ * getDbReference().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link DbReferenceType }
+ *
+ *
+ */
+ public List<DbReferenceType> getDbReference()
+ {
+ if (dbReference == null)
+ {
+ dbReference = new ArrayList<DbReferenceType>();
}
-
- /**
- * Gets the value of the lineage property.
- *
- * @return
- * possible object is
- * {@link OrganismType.Lineage }
- *
- */
- public OrganismType.Lineage getLineage() {
- return lineage;
+ return this.dbReference;
+ }
+
+ /**
+ * Gets the value of the lineage property.
+ *
+ * @return possible object is {@link OrganismType.Lineage }
+ *
+ */
+ public OrganismType.Lineage getLineage()
+ {
+ return lineage;
+ }
+
+ /**
+ * Sets the value of the lineage property.
+ *
+ * @param value
+ * allowed object is {@link OrganismType.Lineage }
+ *
+ */
+ public void setLineage(OrganismType.Lineage value)
+ {
+ this.lineage = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list, not a snapshot.
+ * Therefore any modification you make to the returned list will be present
+ * inside the JAXB object. This is why there is not a <CODE>set</CODE> method
+ * for the evidence property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ *
+ * <pre>
+ * getEvidence().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list {@link Integer }
+ *
+ *
+ */
+ public List<Integer> getEvidence()
+ {
+ if (evidence == null)
+ {
+ evidence = new ArrayList<Integer>();
}
+ return this.evidence;
+ }
+
+ /**
+ * <p>
+ * Java class for anonymous complex type.
+ *
+ * <p>
+ * The following schema fragment specifies the expected content contained
+ * within this class.
+ *
+ * <pre>
+ * <complexType>
+ * <complexContent>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ * <sequence>
+ * <element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/>
+ * </sequence>
+ * </restriction>
+ * </complexContent>
+ * </complexType>
+ * </pre>
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "taxon" })
+ public static class Lineage
+ {
- /**
- * Sets the value of the lineage property.
- *
- * @param value
- * allowed object is
- * {@link OrganismType.Lineage }
- *
- */
- public void setLineage(OrganismType.Lineage value) {
- this.lineage = value;
- }
+ @XmlElement(required = true)
+ protected List<String> taxon;
/**
- * Gets the value of the evidence property.
+ * Gets the value of the taxon property.
*
- * <p>
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a <CODE>set</CODE> method for the evidence property.
+ * <p>
+ * This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will
+ * be present inside the JAXB object. This is why there is not a
+ * <CODE>set</CODE> method for the taxon property.
*
- * <p>
+ * <p>
* For example, to add a new item, do as follows:
- * <pre>
- * getEvidence().add(newItem);
- * </pre>
*
+ * <pre>
+ * getTaxon().add(newItem);
+ * </pre>
*
- * <p>
- * Objects of the following type(s) are allowed in the list
- * {@link Integer }
*
- *
- */
- public List<Integer> getEvidence() {
- if (evidence == null) {
- evidence = new ArrayList<Integer>();
- }
- return this.evidence;
- }
-
-
- /**
- * <p>Java class for anonymous complex type.
- *
- * <p>The following schema fragment specifies the expected content contained within this class.
- *
- * <pre>
- * &lt;complexType&gt;
- * &lt;complexContent&gt;
- * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
- * &lt;sequence&gt;
- * &lt;element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/&gt;
- * &lt;/sequence&gt;
- * &lt;/restriction&gt;
- * &lt;/complexContent&gt;
- * &lt;/complexType&gt;
- * </pre>
+ * <p>
+ * Objects of the following type(s) are allowed in the list {@link String }
*
*
*/
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = {
- "taxon"
- })
- public static class Lineage {
-
- @XmlElement(required = true)
- protected List<String> taxon;
-
- /**
- * Gets the value of the taxon property.
- *
- * <p>
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a <CODE>set</CODE> method for the taxon property.
- *
- * <p>
- * For example, to add a new item, do as follows:
- * <pre>
- * getTaxon().add(newItem);
- * </pre>
- *
- *
- * <p>
- * Objects of the following type(s) are allowed in the list
- * {@link String }
- *
- *
- */
- public List<String> getTaxon() {
- if (taxon == null) {
- taxon = new ArrayList<String>();
- }
- return this.taxon;
- }
-
+ public List<String> getTaxon()
+ {
+ if (taxon == null)
+ {
+ taxon = new ArrayList<String>();
+ }
+ return this.taxon;
}
+ }
+
}
git://source.jalview.org / jalview.git / blobdiff