-/**\r
- * Alignment.java\r
- *\r
- * This file was auto-generated from WSDL\r
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.\r
- */\r
-\r
-/*\r
-* Jalview - A Sequence Alignment Editor and Viewer\r
-* Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
-*\r
-* This program is free software; you can redistribute it and/or\r
-* modify it under the terms of the GNU General Public License\r
-* as published by the Free Software Foundation; either version 2\r
-* of the License, or (at your option) any later version.\r
-*\r
-* This program is distributed in the hope that it will be useful,\r
-* but WITHOUT ANY WARRANTY; without even the implied warranty of\r
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
-* GNU General Public License for more details.\r
-*\r
-* You should have received a copy of the GNU General Public License\r
-* along with this program; if not, write to the Free Software\r
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
-*/\r
-package vamsas.objects.simple;\r
-\r
-public class Alignment extends vamsas.objects.simple.Object\r
- implements java.io.Serializable {\r
- private java.lang.String gapchar;\r
- private java.lang.String[] method;\r
- private vamsas.objects.simple.SequenceSet seqs;\r
- private java.lang.Object __equalsCalc = null;\r
- private boolean __hashCodeCalc = false;\r
-\r
- public Alignment() {\r
- }\r
-\r
- public Alignment(java.lang.String gapchar, java.lang.String[] method,\r
- vamsas.objects.simple.SequenceSet seqs) {\r
- this.gapchar = gapchar;\r
- this.method = method;\r
- this.seqs = seqs;\r
- }\r
-\r
- /**\r
- * Gets the gapchar value for this Alignment.\r
- *\r
- * @return gapchar\r
- */\r
- public java.lang.String getGapchar() {\r
- return gapchar;\r
- }\r
-\r
- /**\r
- * Sets the gapchar value for this Alignment.\r
- *\r
- * @param gapchar\r
- */\r
- public void setGapchar(java.lang.String gapchar) {\r
- this.gapchar = gapchar;\r
- }\r
-\r
- /**\r
- * Gets the method value for this Alignment.\r
- *\r
- * @return method\r
- */\r
- public java.lang.String[] getMethod() {\r
- return method;\r
- }\r
-\r
- /**\r
- * Sets the method value for this Alignment.\r
- *\r
- * @param method\r
- */\r
- public void setMethod(java.lang.String[] method) {\r
- this.method = method;\r
- }\r
-\r
- /**\r
- * Gets the seqs value for this Alignment.\r
- *\r
- * @return seqs\r
- */\r
- public vamsas.objects.simple.SequenceSet getSeqs() {\r
- return seqs;\r
- }\r
-\r
- /**\r
- * Sets the seqs value for this Alignment.\r
- *\r
- * @param seqs\r
- */\r
- public void setSeqs(vamsas.objects.simple.SequenceSet seqs) {\r
- this.seqs = seqs;\r
- }\r
-\r
- public synchronized boolean equals(java.lang.Object obj) {\r
- if (!(obj instanceof Alignment)) {\r
- return false;\r
- }\r
-\r
- Alignment other = (Alignment) obj;\r
-\r
- if (obj == null) {\r
- return false;\r
- }\r
-\r
- if (this == obj) {\r
- return true;\r
- }\r
-\r
- if (__equalsCalc != null) {\r
- return (__equalsCalc == obj);\r
- }\r
-\r
- __equalsCalc = obj;\r
-\r
- boolean _equals;\r
- _equals = super.equals(obj) &&\r
- (((this.gapchar == null) && (other.getGapchar() == null)) ||\r
- ((this.gapchar != null) && this.gapchar.equals(other.getGapchar()))) &&\r
- (((this.method == null) && (other.getMethod() == null)) ||\r
- ((this.method != null) &&\r
- java.util.Arrays.equals(this.method, other.getMethod()))) &&\r
- (((this.seqs == null) && (other.getSeqs() == null)) ||\r
- ((this.seqs != null) && this.seqs.equals(other.getSeqs())));\r
- __equalsCalc = null;\r
-\r
- return _equals;\r
- }\r
-\r
- public synchronized int hashCode() {\r
- if (__hashCodeCalc) {\r
- return 0;\r
- }\r
-\r
- __hashCodeCalc = true;\r
-\r
- int _hashCode = super.hashCode();\r
-\r
- if (getGapchar() != null) {\r
- _hashCode += getGapchar().hashCode();\r
- }\r
-\r
- if (getMethod() != null) {\r
- for (int i = 0; i < java.lang.reflect.Array.getLength(getMethod());\r
- i++) {\r
- java.lang.Object obj = java.lang.reflect.Array.get(getMethod(),\r
- i);\r
-\r
- if ((obj != null) && !obj.getClass().isArray()) {\r
- _hashCode += obj.hashCode();\r
- }\r
- }\r
- }\r
-\r
- if (getSeqs() != null) {\r
- _hashCode += getSeqs().hashCode();\r
- }\r
-\r
- __hashCodeCalc = false;\r
-\r
- return _hashCode;\r
- }\r
-}\r
+/**
+ * Alignment.java
+ *
+ * This file was auto-generated from WSDL
+ * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
+ */
+
+package vamsas.objects.simple;
+
+public class Alignment extends vamsas.objects.simple.Object implements java.io.Serializable {
+ private java.lang.String gapchar;
+ private java.lang.String[] method;
+ private vamsas.objects.simple.SequenceSet seqs;
+
+ public Alignment() {
+ }
+
+ public Alignment(
+ java.lang.String gapchar,
+ java.lang.String[] method,
+ vamsas.objects.simple.SequenceSet seqs) {
+ this.gapchar = gapchar;
+ this.method = method;
+ this.seqs = seqs;
+ }
+
+
+ /**
+ * Gets the gapchar value for this Alignment.
+ *
+ * @return gapchar
+ */
+ public java.lang.String getGapchar() {
+ return gapchar;
+ }
+
+
+ /**
+ * Sets the gapchar value for this Alignment.
+ *
+ * @param gapchar
+ */
+ public void setGapchar(java.lang.String gapchar) {
+ this.gapchar = gapchar;
+ }
+
+
+ /**
+ * Gets the method value for this Alignment.
+ *
+ * @return method
+ */
+ public java.lang.String[] getMethod() {
+ return method;
+ }
+
+
+ /**
+ * Sets the method value for this Alignment.
+ *
+ * @param method
+ */
+ public void setMethod(java.lang.String[] method) {
+ this.method = method;
+ }
+
+
+ /**
+ * Gets the seqs value for this Alignment.
+ *
+ * @return seqs
+ */
+ public vamsas.objects.simple.SequenceSet getSeqs() {
+ return seqs;
+ }
+
+
+ /**
+ * Sets the seqs value for this Alignment.
+ *
+ * @param seqs
+ */
+ public void setSeqs(vamsas.objects.simple.SequenceSet seqs) {
+ this.seqs = seqs;
+ }
+
+ private java.lang.Object __equalsCalc = null;
+ public synchronized boolean equals(java.lang.Object obj) {
+ if (!(obj instanceof Alignment)) return false;
+ Alignment other = (Alignment) obj;
+ if (obj == null) return false;
+ if (this == obj) return true;
+ if (__equalsCalc != null) {
+ return (__equalsCalc == obj);
+ }
+ __equalsCalc = obj;
+ boolean _equals;
+ _equals = super.equals(obj) &&
+ ((this.gapchar==null && other.getGapchar()==null) ||
+ (this.gapchar!=null &&
+ this.gapchar.equals(other.getGapchar()))) &&
+ ((this.method==null && other.getMethod()==null) ||
+ (this.method!=null &&
+ java.util.Arrays.equals(this.method, other.getMethod()))) &&
+ ((this.seqs==null && other.getSeqs()==null) ||
+ (this.seqs!=null &&
+ this.seqs.equals(other.getSeqs())));
+ __equalsCalc = null;
+ return _equals;
+ }
+
+ private boolean __hashCodeCalc = false;
+ public synchronized int hashCode() {
+ if (__hashCodeCalc) {
+ return 0;
+ }
+ __hashCodeCalc = true;
+ int _hashCode = super.hashCode();
+ if (getGapchar() != null) {
+ _hashCode += getGapchar().hashCode();
+ }
+ if (getMethod() != null) {
+ for (int i=0;
+ i<java.lang.reflect.Array.getLength(getMethod());
+ i++) {
+ java.lang.Object obj = java.lang.reflect.Array.get(getMethod(), i);
+ if (obj != null &&
+ !obj.getClass().isArray()) {
+ _hashCode += obj.hashCode();
+ }
+ }
+ }
+ if (getSeqs() != null) {
+ _hashCode += getSeqs().hashCode();
+ }
+ __hashCodeCalc = false;
+ return _hashCode;
+ }
+
+}
git://source.jalview.org / jalview.git / blobdiff