JAL-4090 JAL-1551 source license

[jalview.git] / test / jalview / analysis / AverageDistanceEngineTest.java

diff --git a/test/jalview/analysis/AverageDistanceEngineTest.java b/test/jalview/analysis/AverageDistanceEngineTest.java
index f7688b5..236e354 100644 (file)
--- a/test/jalview/analysis/AverageDistanceEngineTest.java
+++ b/test/jalview/analysis/AverageDistanceEngineTest.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.analysis;
 
 import java.io.File;
@@ -45,7 +65,7 @@ public class AverageDistanceEngineTest
     Cache.loadProperties("test/jalview/bin/TestProps.jvprops");
   }
 
-  @Test
+  @Test(groups = { "Functional" })
   public void testUPGMAEngine() throws Exception
   {
     AlignFrame af = new FileLoader(false).LoadFileWaitTillLoaded(
@@ -67,7 +87,7 @@ public class AverageDistanceEngineTest
             + matrix.getMin());
     long start = System.currentTimeMillis();
     AverageDistanceEngine clusterer = new AverageDistanceEngine(
-            af.getViewport(), null, matrix);
+            af.getViewport(), null, matrix, false);
     System.out.println("built a tree in "
             + (System.currentTimeMillis() - start) * 0.001 + " seconds.");
     StringBuffer sb = new StringBuffer();
@@ -103,7 +123,6 @@ public class AverageDistanceEngineTest
       }
       System.out.println("\\");
     }
-
   }
 
 }