import jalview.datamodel.Sequence;
import jalview.gui.AlignFrame;
import jalview.gui.JvOptionPane;
+import jalview.io.DataSourceType;
import jalview.io.FileLoader;
-import jalview.io.FormatAdapter;
import java.util.List;
String seqData = "seq1 ABCD--EF-GHI\n" + "seq2 A--BCDefHI\n"
+ "seq3 --bcdEFH\n" + "seq4 aa---aMMMMMaaa\n";
af = new FileLoader().LoadFileWaitTillLoaded(seqData,
- FormatAdapter.PASTE);
+ DataSourceType.PASTE);
al = af.getViewport().getAlignment();
}