JAL-4334 failing test using whole of Q29079 accession. Can be trimmed.

[jalview.git] / test / jalview / datamodel / MappingTest.java

diff --git a/test/jalview/datamodel/MappingTest.java b/test/jalview/datamodel/MappingTest.java
index b326d90..0bf753d 100644 (file)
--- a/test/jalview/datamodel/MappingTest.java
+++ b/test/jalview/datamodel/MappingTest.java
@@ -23,10 +23,12 @@ package jalview.datamodel;
 import static org.testng.AssertJUnit.assertEquals;
 import static org.testng.AssertJUnit.assertSame;
 
+import jalview.gui.JvOptionPane;
 import jalview.util.MapList;
 
 import java.util.Arrays;
 
+import org.testng.annotations.BeforeClass;
 import org.testng.annotations.Test;
 
 /**
@@ -34,6 +36,14 @@ import org.testng.annotations.Test;
  */
 public class MappingTest
 {
+
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
+
   /**
    * trite test of the intersectVisContigs method for a simple DNA -> Protein
    * exon map and a range of visContigs
@@ -41,11 +51,13 @@ public class MappingTest
   @Test(groups = { "Functional" })
   public void testIntersectVisContigs()
   {
-    MapList fk = new MapList(new int[] { 1, 6, 8, 13, 15, 23 }, new int[] {
-        1, 7 }, 3, 1);
+    MapList fk = new MapList(new int[] { 1, 6, 8, 13, 15, 23 },
+            new int[]
+            { 1, 7 }, 3, 1);
     Mapping m = new Mapping(fk);
-    Mapping m_1 = m.intersectVisContigs(new int[] { fk.getFromLowest(),
-        fk.getFromHighest() });
+    Mapping m_1 = m
+            .intersectVisContigs(new int[]
+            { fk.getFromLowest(), fk.getFromHighest() });
     Mapping m_2 = m.intersectVisContigs(new int[] { 1, 7, 11, 20 });
 
     // assertions from output values 'as is', not checked for correctness