+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.datamodel;
import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertFalse;
import static org.testng.Assert.assertTrue;
-import jalview.datamodel.ResidueCount;
import jalview.datamodel.ResidueCount.SymbolCounts;
+import jalview.gui.JvOptionPane;
import org.junit.Assert;
+import org.testng.annotations.BeforeClass;
import org.testng.annotations.Test;
public class ResidueCountTest
{
+
+ @BeforeClass(alwaysRun = true)
+ public void setUpJvOptionPane()
+ {
+ JvOptionPane.setInteractiveMode(false);
+ JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+ }
+
/**
* Test a mix of add and put for nucleotide counting
*/
}
rc.add('F');
+ /*
+ * percentages are rounded (0.5 rounded up)
+ * 10/40 9/40 7/40 6/40 1/40
+ */
assertEquals(rc.getTooltip(40, 0),
- "P 25%; W 22%; C 17%; Q 17%; K 15%; F 2%");
+ "P 25%; W 23%; C 18%; Q 18%; K 15%; F 3%");
+ rc.add('Q');
+ /*
+ * 10/30 9/30 8/30 7/30 6/30 1/30
+ */
assertEquals(rc.getTooltip(30, 1),
- "P 33.3%; W 30.0%; C 23.3%; Q 23.3%; K 20.0%; F 3.3%");
+ "P 33.3%; W 30.0%; Q 26.7%; C 23.3%; K 20.0%; F 3.3%");
}
@Test(groups = "Functional")