+ "<tr><td>Type</td><td>variant</td><td></td></tr>"
+ "<tr><td>Description</td><td>G,C</td><td></td></tr>"
+ "<tr><td>Consequence</td><td><i>Translated by Jalview</i></td><td>p.Leu9Phe</td></tr>"
- + "<tr><td>alleles</td><td></td><td>G,C</td></tr>"
- + "</table>";
+ + "<tr><td>alleles</td><td></td><td>G,C</td></tr>" + "</table>";
assertEquals(expected, sf.getDetailsReport(seq.getName(), mf));
-
/*
* exon feature extending beyond mapped range; mapped location should be
* restricted to peptide mapped range limit i.e. 10-13
*/
- SequenceFeature sf2 = new SequenceFeature("exon", "exon 1", 109, 230, null);
+ SequenceFeature sf2 = new SequenceFeature("exon", "exon 1", 109, 230,
+ null);
features.add(sf2);
expected = "<br><table><tr><td>Location</td><td>Cds</td><td>109-230</td></tr>"
+ "<tr><td>Peptide Location</td><td>TestSeq</td><td>10-13</td></tr>"