JAL-2046 ambiguous test for addSequenceFeature when dataset ref is present or absent

[jalview.git] / test / jalview / datamodel / SequenceTest.java

diff --git a/test/jalview/datamodel/SequenceTest.java b/test/jalview/datamodel/SequenceTest.java
index 24a63dc..3165ec9 100644 (file)
--- a/test/jalview/datamodel/SequenceTest.java
+++ b/test/jalview/datamodel/SequenceTest.java
@@ -310,9 +310,13 @@ public class SequenceTest
     assertEquals(1, sfs.length);
     assertSame(sf, sfs[0]);
 
+
     /*
      * SequenceFeature on sequence and dataset sequence; returns that on
      * sequence
+     * 
+     * Note JAL-2046: spurious: we have no use case for this at the moment.
+     * This test also buggy - as sf2.equals(sf), no new feature is added
      */
     SequenceFeature sf2 = new SequenceFeature();
     sq.getDatasetSequence().addSequenceFeature(sf2);
@@ -471,6 +475,8 @@ public class SequenceTest
     seq1.setDescription("description");
     seq1.addAlignmentAnnotation(new AlignmentAnnotation("label", "desc",
             1.3d));
+    // JAL-2046 - what is the contract for using a derived sequence's
+    // addSequenceFeature ?
     seq1.addSequenceFeature(new SequenceFeature("type", "desc", 22, 33,
             12.4f, "group"));
     seq1.addPDBId(new PDBEntry("1A70", "B", Type.PDB, "File"));