BitSet gapfield = aseq.getInsertionsAsBits();
BitSet expectedgaps = new BitSet();
- expectedgaps.set(2, 4);
- expectedgaps.set(6, 8);
+ expectedgaps.set(2, 5);
+ expectedgaps.set(6, 9);
+
+ assertEquals(6, expectedgaps.cardinality());
+
+ assertEquals("getInsertionsAsBits didn't mark expected number of gaps",
+ 6, gapfield.cardinality());
assertEquals("getInsertionsAsBits not correct.", expectedgaps, gapfield);
}