assertEquals(5, dbrefs.length);
assertEquals(DBRefSource.EMBL, dbrefs[0].getSource());
assertEquals("CAA30420.1", dbrefs[0].getAccessionId());
+ // TODO: verify getPrimaryDBRefs() for peptide products
assertEquals(cds1Map.getInverse(), dbrefs[0].getMap().getMap());
assertEquals(DBRefSource.EMBLCDS, dbrefs[1].getSource());
assertEquals("CAA30420.1", dbrefs[1].getAccessionId());
// truncate last exon by 6bp
int[] truncated = EmblEntry.adjustForProteinLength(4, exons);
- assertEquals("[11, 15, 21, 25, 31, 32]",
- Arrays.toString(truncated));
+ assertEquals("[11, 15, 21, 25, 31, 32]", Arrays.toString(truncated));
// remove last exon and truncate preceding by 1bp
truncated = EmblEntry.adjustForProteinLength(3, exons);