Merge branch 'kjvdh/features/PhylogenyViewer_tabbedsupport' into merge/2_11_2/kjvdh...
[jalview.git] / test / jalview / ext / ensembl / EnsemblCdnaTest.java
index 9e9d9a4..d2559ae 100644 (file)
@@ -20,6 +20,8 @@
  */
 package jalview.ext.ensembl;
 
+import java.util.Locale;
+
 import static org.testng.AssertJUnit.assertEquals;
 import static org.testng.AssertJUnit.assertFalse;
 import static org.testng.AssertJUnit.assertNull;
@@ -209,20 +211,21 @@ public class EnsemblCdnaTest
     String accId = "ABC123";
     EnsemblCdna testee = new EnsemblCdna();
 
-    SequenceFeature sf = new SequenceFeature("transcript", "", 20000,
-            20500, 0f, null);
+    SequenceFeature sf = new SequenceFeature("transcript", "", 20000, 20500,
+            0f, null);
     assertFalse(testee.retainFeature(sf, accId));
 
     sf = new SequenceFeature("aberrant_processed_transcript", "", 20000,
             20500, 0f, null);
     assertFalse(testee.retainFeature(sf, accId));
 
-    sf = new SequenceFeature("NMD_transcript_variant", "", 20000, 20500,
-            0f, null);
+    sf = new SequenceFeature("NMD_transcript_variant", "", 20000, 20500, 0f,
+            null);
     assertFalse(testee.retainFeature(sf, accId));
 
     // other feature with no parent is retained
-    sf = new SequenceFeature("sequence_variant", "", 20000, 20500, 0f, null);
+    sf = new SequenceFeature("sequence_variant", "", 20000, 20500, 0f,
+            null);
     assertTrue(testee.retainFeature(sf, accId));
 
     // other feature with desired parent is retained
@@ -230,7 +233,7 @@ public class EnsemblCdnaTest
     assertTrue(testee.retainFeature(sf, accId));
 
     // test is not case-sensitive
-    assertTrue(testee.retainFeature(sf, accId.toLowerCase()));
+    assertTrue(testee.retainFeature(sf, accId.toLowerCase(Locale.ROOT)));
 
     // feature with wrong parent is not retained
     sf.setValue("Parent", "XYZ");