package jalview.ext.jmol;
import jalview.datamodel.SequenceI;
+import jalview.gui.JvOptionPane;
import jalview.io.DataSourceType;
import java.io.File;
import java.util.Set;
import java.util.Vector;
-import MCview.PDBfile;
+import org.testng.annotations.BeforeClass;
+
+import mc_view.PDBfile;
/**
* This is not a unit test, rather it is a bulk End-to-End scan for sequences
public class JmolVsJalviewPDBParserEndToEndTest
{
+ @BeforeClass(alwaysRun = true)
+ public void setUpJvOptionPane()
+ {
+ JvOptionPane.setInteractiveMode(false);
+ JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+ }
+
+ /**
+ *
+ * @param args
+ * @j2sIgnore
+ */
public static void main(String[] args)
{
if (args == null || args[0] == null)
public static void testFileParser(String testDir, String[] testFiles)
{
- Set<String> failedFiles = new HashSet<String>();
+ Set<String> failedFiles = new HashSet<>();
int totalSeqScanned = 0, totalFail = 0;
for (String pdbStr : testFiles)
{