import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertTrue;
-import jalview.datamodel.Alignment;
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.SequenceI;
-import jalview.gui.AlignFrame;
-import jalview.io.AppletFormatAdapter;
-import jalview.io.FileLoader;
import java.util.Vector;
+import org.junit.Before;
import org.junit.Test;
import MCview.PDBfile;
+import jalview.bin.Cache;
+import jalview.datamodel.Alignment;
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.SequenceI;
+import jalview.gui.AlignFrame;
+import jalview.io.AppletFormatAdapter;
+import jalview.io.FileLoader;
+
/**
* @author jimp
*
// "./examples/DNMT1_MOUSE.pdb"
// };
+ @Before
+ public void setUp()
+ {
+ Cache.applicationProperties.setProperty("STRUCT_FROM_PDB",
+ Boolean.TRUE.toString());
+ Cache.applicationProperties.setProperty("ADD_SS_ANN",
+ Boolean.TRUE.toString());
+ }
+
@Test
public void testAlignmentLoader() throws Exception
{