JAL-1853 make getVisibleSeqs more memory efficient by clipping sequences as the seque...

[jalview.git] / test / jalview / ext / paradise / TestAnnotate3D.java

diff --git a/test/jalview/ext/paradise/TestAnnotate3D.java b/test/jalview/ext/paradise/TestAnnotate3D.java
index d4f57d8..126c221 100644 (file)
--- a/test/jalview/ext/paradise/TestAnnotate3D.java
+++ b/test/jalview/ext/paradise/TestAnnotate3D.java
@@ -22,6 +22,11 @@ package jalview.ext.paradise;
 
 import static org.testng.AssertJUnit.assertTrue;
 
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.SequenceI;
+import jalview.io.FastaFile;
+import jalview.io.FormatAdapter;
+
 import java.io.BufferedReader;
 import java.io.File;
 import java.io.Reader;
@@ -35,15 +40,11 @@ import MCview.PDBfile;
 
 import compbio.util.FileUtil;
 
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.SequenceI;
-import jalview.io.FastaFile;
-import jalview.io.FormatAdapter;
-
 public class TestAnnotate3D
 {
 
-  @Test(enabled = false)
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void test1GIDbyId() throws Exception
   {
     // use same ID as standard tests given at
@@ -53,7 +54,8 @@ public class TestAnnotate3D
     testRNAMLcontent(ids, null);
   }
 
-  @Test(enabled = false)
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void testIdVsContent2GIS() throws Exception
   {
     Iterator<Reader> ids = Annotate3D.getRNAMLForPDBId("2GIS");
@@ -97,7 +99,8 @@ public class TestAnnotate3D
    * 
    * @throws Exception
    */
-  @Test(enabled = false)
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void testPDBfileVsRNAML() throws Exception
   {
     PDBfile pdbf = new PDBfile(true, false, true, "examples/2GIS.pdb",
@@ -111,7 +114,8 @@ public class TestAnnotate3D
     testRNAMLcontent(readers, pdbf);
   }
 
-  @Test(enabled = false)
+  @Test(groups =
+  { "Functional" }, enabled = false)
   private void testRNAMLcontent(Iterator<Reader> readers, PDBfile pdbf)
           throws Exception
   {