reconciled with applet
[jalview.git] / test / jalview / ext / paradise / TestAnnotate3D.java
index 85fc039..7d0916b 100644 (file)
@@ -40,9 +40,8 @@ import org.testng.AssertJUnit;
 import org.testng.annotations.BeforeClass;
 import org.testng.annotations.Test;
 
-import MCview.PDBfile;
-
 import compbio.util.FileUtil;
+import mc_view.PDBfile;
 
 public class TestAnnotate3D
 {
@@ -152,10 +151,10 @@ public class TestAnnotate3D
         {
           {
             SequenceI struseq = null;
-            String sq_ = new String(sq.getSequence()).toLowerCase();
+            String sq_ = sq.getSequenceAsString().toLowerCase();
             for (SequenceI _struseq : pdbf.getSeqsAsArray())
             {
-              final String lowerCase = new String(_struseq.getSequence())
+              final String lowerCase = _struseq.getSequenceAsString()
                       .toLowerCase();
               if (lowerCase.equals(sq_))
               {