JAL-4160 update args used in test suite for new CLI framework

[jalview.git] / test / jalview / gui / AlignmentPanelTest.java

diff --git a/test/jalview/gui/AlignmentPanelTest.java b/test/jalview/gui/AlignmentPanelTest.java
index 85ca37c..86b22d5 100644 (file)
--- a/test/jalview/gui/AlignmentPanelTest.java
+++ b/test/jalview/gui/AlignmentPanelTest.java
@@ -22,6 +22,17 @@ package jalview.gui;
 
 import static org.testng.Assert.assertEquals;
 import static org.testng.Assert.assertNotEquals;
+import static org.testng.Assert.assertNotNull;
+
+import java.awt.Dimension;
+import java.awt.Font;
+import java.awt.FontMetrics;
+import java.lang.reflect.InvocationTargetException;
+
+import javax.swing.SwingUtilities;
+
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
 
 import jalview.api.AlignViewportI;
 import jalview.bin.Cache;
@@ -32,21 +43,16 @@ import jalview.io.DataSourceType;
 import jalview.io.FileLoader;
 import jalview.viewmodel.ViewportRanges;
 
-import java.awt.Dimension;
-import java.awt.Font;
-
-import org.testng.annotations.BeforeMethod;
-import org.testng.annotations.Test;
-
 public class AlignmentPanelTest
 {
   AlignFrame af;
 
   @BeforeMethod(alwaysRun = true)
-  public void setUp()
+  public void setUp() throws InvocationTargetException, InterruptedException
   {
-    Jalview.main(new String[] { "-nonews", "-props",
-        "test/jalview/testProps.jvprops" });
+    Jalview.main(
+            new String[]
+            { "--nonews", "--props", "test/jalview/testProps.jvprops" });
 
     Cache.applicationProperties.setProperty("SHOW_IDENTITY",
             Boolean.TRUE.toString());
@@ -54,20 +60,29 @@ public class AlignmentPanelTest
             DataSourceType.FILE);
 
     /*
+     * ensure the panel has been repainted and so ViewportRanges set
+     */
+    SwingUtilities.invokeAndWait(new Runnable()
+    {
+      @Override
+      public void run()
+      {
+        af.repaint();
+      }
+    });
+
+    /*
      * wait for Consensus thread to complete
      */
-    synchronized (this)
+    do
     {
-      while (af.getViewport().getConsensusSeq() == null)
+      try
+      {
+        Thread.sleep(50);
+      } catch (InterruptedException x)
       {
-        try
-        {
-          wait(50);
-        } catch (InterruptedException e)
-        {
-        }
       }
-    }
+    } while (af.getViewport().getCalcManager().isWorking());
   }
 
   /**
@@ -117,8 +132,8 @@ public class AlignmentPanelTest
     scrollpos = 130;
     af.getViewport().showAllHiddenColumns();
     af.alignPanel.setScrollValues(scrollpos, 5);
-    assertEquals(ranges.getEndRes(), af.getViewport()
-            .getAlignment().getWidth() - 1);
+    assertEquals(ranges.getEndRes(),
+            af.getViewport().getAlignment().getWidth() - 1);
 
     // now hide some columns, and scroll to position within <width>
     // distance of the end of the alignment
@@ -126,9 +141,11 @@ public class AlignmentPanelTest
     // columns
     af.getViewport().hideColumns(30, 50);
     af.alignPanel.setScrollValues(scrollpos, 5);
-    assertEquals(ranges.getEndRes(), af.getViewport()
-            .getAlignment().getWidth() - 1 - 21); // 21 is the number of hidden
-                                                  // columns
+    assertEquals(ranges.getEndRes(),
+            af.getViewport().getAlignment().getWidth() - 1 - 21); // 21 is the
+                                                                  // number of
+                                                                  // hidden
+                                                                  // columns
   }
 
   /**
@@ -158,8 +175,8 @@ public class AlignmentPanelTest
   }
 
   /**
-   * Test the variant of calculateIdWidth that only recomputes the width if it is
-   * not already saved in the viewport (initial value is -1)
+   * Test the variant of calculateIdWidth that only recomputes the width if it
+   * is not already saved in the viewport (initial value is -1)
    */
   @Test(groups = "Functional")
   public void testCalculateIdWidth_noArgs()
@@ -226,8 +243,13 @@ public class AlignmentPanelTest
      */
     AlignmentAnnotation aa = av.getAlignment().getAlignmentAnnotation()[0];
     aa.label = "THIS IS A VERY LONG LABEL INDEED";
+    FontMetrics fmfor = af.alignPanel
+            .getFontMetrics(af.alignPanel.getAlabels().getFont());
+    // Assumption ID_WIDTH_PADDING == 4
+    int expwidth = 4 + fmfor.stringWidth(aa.label);
     d = af.alignPanel.calculateIdWidth(2000);
-    assertEquals(d.width, 229); // 4 + pixel width of "THIS IS A VERY LONG LABEL INDEED"
+    assertEquals(d.width, expwidth); // 228 == ID_WIDTH_PADDING + pixel width of
+                                     // "THIS IS A VERY LONG LABEL INDEED"
     assertEquals(d.height, 12);
 
     /*
@@ -239,7 +261,7 @@ public class AlignmentPanelTest
     assertEquals(d.height, 12);
   }
 
-  @Test(groups = "Functional")
+  @Test(groups = { "Functional", "Not-bamboo" })
   public void testGetVisibleWidth()
   {
     /*
@@ -269,4 +291,45 @@ public class AlignmentPanelTest
     Cache.setProperty("FIGURE_AUTOIDWIDTH", Boolean.TRUE.toString());
     assertEquals(115, af.alignPanel.getVisibleIdWidth(false));
   }
-}
+
+  @Test(groups = "Functional")
+  public void testSetOverviewTitle()
+  {
+    OverviewPanel ov1 = this.af.openOverviewPanel(true);
+    String alignFrameTitle = af.getTitle();
+    assertEquals(ov1.getTitle(), "Overview " + alignFrameTitle);
+
+    /*
+     * on New View, existing overview should get " Original" added to title
+     * and new view's overview should get " View 1" added
+     */
+    af.newView_actionPerformed(null);
+    assertEquals(ov1.getTitle(),
+            "Overview " + alignFrameTitle + " Original");
+    OverviewPanel ov2 = this.af.openOverviewPanel(true);
+    assertEquals(ov2.getTitle(), "Overview " + alignFrameTitle + " View 1");
+  }
+
+  @Test(groups = "Functional")
+  public void testSetOverviewTitle_automaticOverview()
+  {
+    Cache.setProperty("SHOW_OVERVIEW", "true");
+    AlignFrame alignFrame = new FileLoader().LoadFileWaitTillLoaded(
+            "examples/uniref50.fa", DataSourceType.FILE);
+    OverviewPanel ov1 = alignFrame.alignPanel.getOverviewPanel();
+    assertNotNull(ov1);
+    String alignFrameTitle = alignFrame.getTitle();
+    assertEquals(ov1.getTitle(), "Overview " + alignFrameTitle);
+
+    /*
+     * on New View, existing overview should get " Original" added to title
+     * and new view's automatic overview should have " View 1" added
+     */
+    alignFrame.newView_actionPerformed(null);
+    assertEquals(ov1.getTitle(),
+            "Overview " + alignFrameTitle + " Original");
+    OverviewPanel ov2 = alignFrame.alignPanel.getOverviewPanel();
+    assertNotNull(ov2);
+    assertEquals(ov2.getTitle(), "Overview " + alignFrameTitle + " View 1");
+  }
+}
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