merge

[jalview.git] / test / jalview / gui / PDBSearchPanelTest.java

diff --git a/test/jalview/gui/PDBSearchPanelTest.java b/test/jalview/gui/PDBSearchPanelTest.java
index 17ba85a..2310373 100644 (file)
--- a/test/jalview/gui/PDBSearchPanelTest.java
+++ b/test/jalview/gui/PDBSearchPanelTest.java
@@ -1,28 +1,49 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.gui;
 
-import static org.junit.Assert.assertTrue;
+import static org.testng.AssertJUnit.assertEquals;
+import static org.testng.AssertJUnit.assertTrue;
 
 import javax.swing.JInternalFrame;
 import javax.swing.JTextField;
 
-import org.junit.After;
-import org.junit.Before;
-import org.junit.Test;
+import org.testng.annotations.AfterMethod;
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
 
 public class PDBSearchPanelTest
 {
 
-  @Before
+  @BeforeMethod(alwaysRun = true)
   public void setUp() throws Exception
   {
   }
 
-  @After
+  @AfterMethod
   public void tearDown() throws Exception
   {
   }
 
-  @Test
+  @Test(groups = { "Functional" })
   public void populateCmbSearchTargetOptionsTest()
   {
     PDBSearchPanel searchPanel = new PDBSearchPanel(null);
@@ -30,7 +51,44 @@ public class PDBSearchPanelTest
     searchPanel.populateCmbSearchTargetOptions();
   }
 
-  @Test
+  @Test(groups = { "Functional" })
+  public void testDecodeSearchTerm()
+  {
+    String expectedString = "1xyz OR text:2xyz OR text:3xyz";
+    String outcome = PDBSearchPanel.decodeSearchTerm("1xyz:A;2xyz;3xyz",
+            "text");
+    // System.out.println("1 >>>>>>>>>>> " + outcome);
+    assertEquals(expectedString, outcome);
+
+    expectedString = "1xyz";
+    outcome = PDBSearchPanel.decodeSearchTerm("1xyz", "text");
+    // System.out.println("2 >>>>>>>>>>> " + outcome);
+    assertEquals(expectedString, outcome);
+  }
+
+  @Test(groups = { "Functional" })
+  public void testgetPDBIdwithSpecifiedChain()
+  {
+
+    String expectedString = "1xyz:A";
+    String outcome = PDBSearchPanel.getPDBIdwithSpecifiedChain("1xyz",
+            "2xyz;3xyz;1xyz:A");
+    System.out.println("1 >>>>>>>>>>> " + outcome);
+    assertEquals(expectedString, outcome);
+
+    expectedString = "2xyz";
+    outcome = PDBSearchPanel.getPDBIdwithSpecifiedChain("2xyz",
+            "1xyz:A;2xyz;3xyz");
+    System.out.println("2 >>>>>>>>>>> " + outcome);
+    assertEquals(expectedString, outcome);
+
+    expectedString = "2xyz:A";
+    outcome = PDBSearchPanel.getPDBIdwithSpecifiedChain("2xyz", "2xyz:A");
+    System.out.println("3 >>>>>>>>>>> " + outcome);
+    assertEquals(expectedString, outcome);
+  }
+
+  @Test(groups = { "Network", "External" }, timeOut = 7000)
   public void txt_search_ActionPerformedTest()
   {
     PDBSearchPanel searchPanel = new PDBSearchPanel(null);
@@ -40,11 +98,18 @@ public class PDBSearchPanelTest
     assertTrue(mainFrame.getTitle().length() == 20);
     assertTrue(mainFrame.getTitle()
             .equalsIgnoreCase("PDB Sequence Fetcher"));
-
     txt_search.setText("ABC");
-
+    try
+    {
+      // wait for web-service to handle response
+      Thread.sleep(3000);
+    } catch (InterruptedException e)
+    {
+      e.printStackTrace();
+    }
     assertTrue(mainFrame.getTitle().length() > 20);
     assertTrue(!mainFrame.getTitle().equalsIgnoreCase(
             "PDB Sequence Fetcher"));
   }
+
 }