JAL-2512 And corresponding test

[jalview.git] / test / jalview / gui / SequenceRendererTest.java

diff --git a/test/jalview/gui/SequenceRendererTest.java b/test/jalview/gui/SequenceRendererTest.java
index 0f3d4f6..c80b830 100644 (file)
--- a/test/jalview/gui/SequenceRendererTest.java
+++ b/test/jalview/gui/SequenceRendererTest.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.gui;
 
 import static org.testng.AssertJUnit.assertEquals;
@@ -10,27 +30,52 @@ import jalview.schemes.ZappoColourScheme;
 
 import java.awt.Color;
 
+import org.testng.annotations.BeforeClass;
 import org.testng.annotations.Test;
 
 public class SequenceRendererTest
 {
 
-  @Test(groups ={ "Functional" })
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
+
+  @Test(groups = { "Functional" })
   public void testGetResidueBoxColour_zappo()
   {
     SequenceI seq = new Sequence("name", "MATVLGSPRAPAFF"); // FER1_MAIZE...
-    AlignmentI al = new Alignment(new SequenceI[]
-      { seq });
+    AlignmentI al = new Alignment(new SequenceI[] { seq });
     final AlignViewport av = new AlignViewport(al);
     SequenceRenderer sr = new SequenceRenderer(av);
     av.setGlobalColourScheme(new ZappoColourScheme());
 
     // @see ResidueProperties.zappo
-    assertEquals(Color.pink, sr.getResidueColour(seq, 0, null)); // M
-    assertEquals(Color.green, sr.getResidueColour(seq, 2, null)); // T
-    assertEquals(Color.magenta, sr.getResidueColour(seq, 5, null)); // G
-    assertEquals(Color.orange, sr.getResidueColour(seq, 12, null)); // F
+    assertEquals(Color.pink, sr.getResidueBoxColour(seq, 0)); // M
+    assertEquals(Color.green, sr.getResidueBoxColour(seq, 2)); // T
+    assertEquals(Color.magenta, sr.getResidueBoxColour(seq, 5)); // G
+    assertEquals(Color.orange, sr.getResidueBoxColour(seq, 12)); // F
   }
+
+  @Test(groups = { "Functional" })
+  public void testGetResidueBoxColour_none()
+  {
+    SequenceI seq = new Sequence("name", "MA--TVLGSPRAPAFF");
+    AlignmentI al = new Alignment(new SequenceI[] { seq });
+    final AlignViewport av = new AlignViewport(al);
+    SequenceRenderer sr = new SequenceRenderer(av);
+
+    assertEquals(Color.white, sr.getResidueBoxColour(seq, 0));
+    assertEquals(Color.white, sr.getResidueBoxColour(seq, 2));
+
+    // set for overview
+    sr.forOverview = true;
+    assertEquals(Color.lightGray, sr.getResidueBoxColour(seq, 0));
+    assertEquals(Color.white, sr.getResidueBoxColour(seq, 2));
+  }
+
   // TODO more tests for getResidueBoxColour covering groups, feature rendering,
   // gaps, overview...