JAL-3829 more testing wit tdbeacons data columns and FTSclient

[jalview.git] / test / jalview / gui / StructureChooserTest.java

diff --git a/test/jalview/gui/StructureChooserTest.java b/test/jalview/gui/StructureChooserTest.java
index 3f7a3f8..9529d9f 100644 (file)
--- a/test/jalview/gui/StructureChooserTest.java
+++ b/test/jalview/gui/StructureChooserTest.java
@@ -83,24 +83,21 @@ public class StructureChooserTest
     seq = null;
   }
 
+  @SuppressWarnings("deprecation")
   @Test(groups = { "Functional" })
   public void buildQueryTest()
   {
+    System.out.println("seq >>>> " + seq);
     String query = StructureChooser.buildQuery(seq);
     assertEquals("pdb_id:1tim", query);
-    System.out.println("seq >>>> " + seq);
     seq.getAllPDBEntries().clear();
     query = StructureChooser.buildQuery(seq);
     assertEquals(
             "text:XYZ_1 OR text:XYZ_2 OR text:XYZ_3 OR text:XYZ_4 OR text:4kqy",
             query);
-    try {
-               seq.setDBRefs(null);
-       } catch (InvalidArgumentException e) {
-               // TODO Auto-generated catch block
-               e.printStackTrace();
-       }
+    seq.setDBRefs(null);
     query = StructureChooser.buildQuery(seq);
+    System.out.println(query);
     assertEquals("text:4kqy", query);
 
     DBRefEntry uniprotDBRef = new DBRefEntry();
@@ -119,6 +116,9 @@ public class StructureChooserTest
       dbRef.setAccessionId("XYZ_" + x);
       seq.addDBRef(dbRef);
     }
+    System.out.println("");
+    System.out.println(seq.getDBRefs());
+    System.out.println(query);
     query = StructureChooser.buildQuery(seq);
     assertEquals(
             "uniprot_accession:P12345 OR uniprot_id:P12345 OR pdb_id:1xyz",