JAL-3829 more testing wit tdbeacons data columns and FTSclient

[jalview.git] / test / jalview / gui / StructureChooserTest.java

diff --git a/test/jalview/gui/StructureChooserTest.java b/test/jalview/gui/StructureChooserTest.java
index f69e6b5..9529d9f 100644 (file)
--- a/test/jalview/gui/StructureChooserTest.java
+++ b/test/jalview/gui/StructureChooserTest.java
@@ -31,6 +31,7 @@ import jalview.datamodel.Sequence;
 import jalview.datamodel.SequenceI;
 import jalview.fts.api.FTSData;
 import jalview.jbgui.GStructureChooser.FilterOption;
+import jalview.ws.params.InvalidArgumentException;
 
 import java.util.Collection;
 import java.util.Vector;
@@ -82,12 +83,13 @@ public class StructureChooserTest
     seq = null;
   }
 
+  @SuppressWarnings("deprecation")
   @Test(groups = { "Functional" })
   public void buildQueryTest()
   {
+    System.out.println("seq >>>> " + seq);
     String query = StructureChooser.buildQuery(seq);
     assertEquals("pdb_id:1tim", query);
-    System.out.println("seq >>>> " + seq);
     seq.getAllPDBEntries().clear();
     query = StructureChooser.buildQuery(seq);
     assertEquals(
@@ -95,6 +97,7 @@ public class StructureChooserTest
             query);
     seq.setDBRefs(null);
     query = StructureChooser.buildQuery(seq);
+    System.out.println(query);
     assertEquals("text:4kqy", query);
 
     DBRefEntry uniprotDBRef = new DBRefEntry();
@@ -113,6 +116,9 @@ public class StructureChooserTest
       dbRef.setAccessionId("XYZ_" + x);
       seq.addDBRef(dbRef);
     }
+    System.out.println("");
+    System.out.println(seq.getDBRefs());
+    System.out.println(query);
     query = StructureChooser.buildQuery(seq);
     assertEquals(
             "uniprot_accession:P12345 OR uniprot_id:P12345 OR pdb_id:1xyz",