JAL-1759 merge from develop

[jalview.git] / test / jalview / io / AnnotatedPDBFileInputTest.java

diff --git a/test/jalview/io/AnnotatedPDBFileInputTest.java b/test/jalview/io/AnnotatedPDBFileInputTest.java
index 576201a..feba9cb 100644 (file)
--- a/test/jalview/io/AnnotatedPDBFileInputTest.java
+++ b/test/jalview/io/AnnotatedPDBFileInputTest.java
@@ -4,14 +4,6 @@ import static org.testng.AssertJUnit.assertEquals;
 import static org.testng.AssertJUnit.assertNotNull;
 import static org.testng.AssertJUnit.assertTrue;
 
-import java.io.File;
-
-import org.junit.Assert;
-import org.testng.annotations.AfterClass;
-import org.testng.annotations.BeforeClass;
-import org.testng.annotations.BeforeMethod;
-import org.testng.annotations.Test;
-
 import jalview.bin.Cache;
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
@@ -23,6 +15,14 @@ import jalview.gui.Desktop;
 import jalview.structure.StructureMapping;
 import jalview.structure.StructureSelectionManager;
 
+import java.io.File;
+
+import org.junit.Assert;
+import org.testng.annotations.AfterClass;
+import org.testng.annotations.BeforeClass;
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
+
 public class AnnotatedPDBFileInputTest
 {
 
@@ -47,7 +47,7 @@ public class AnnotatedPDBFileInputTest
             .get(0).getId();
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void checkNoDuplicates()
   {
     // not strictly a requirement, but strange things may happen if multiple
@@ -67,7 +67,7 @@ public class AnnotatedPDBFileInputTest
     }
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void checkPDBannotationSource()
   {
 
@@ -85,7 +85,7 @@ public class AnnotatedPDBFileInputTest
   /**
    * Check sequence features have been added
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void checkPDBSequenceFeatures()
   {
     StructureSelectionManager ssm = StructureSelectionManager
@@ -124,7 +124,7 @@ public class AnnotatedPDBFileInputTest
     assertEquals("TYR:314 1gaqC", sf[295].getDescription());
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void checkAnnotationWiring()
   {
     assertTrue(al.getAlignmentAnnotation() != null);
@@ -173,7 +173,7 @@ public class AnnotatedPDBFileInputTest
 
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testJalviewProjectRelocationAnnotation() throws Exception
   {