SequenceFetcher sf = new SequenceFetcher(Desktop.instance,
forSource, forAccession);
sf.run();
- AlignFrame[] afs = Desktop.getAlignFrames();
+ AlignFrame[] afs = Desktop.getDesktopAlignFrames();
if (afs.length == 0)
{
failedDBRetr.add("Didn't retrieve " + first);
cra_views2.add(af2.getViewport().getAlignPanel());
cra_views2.add(((jalview.gui.AlignViewport) af2
.getViewport().getCodingComplement())
- .getAlignPanel());
+ .getAlignPanel());
}
else
// bottom view, then top
cra_views2.add(((jalview.gui.AlignViewport) af2
.getViewport().getCodingComplement())
- .getAlignPanel());
+ .getAlignPanel());
cra_views2.add(af2.getViewport().getAlignPanel());
}
Assert.assertEquals(cra_views2.size(), 2);