/**
* @throws java.lang.Exception
*/
- @BeforeClass
+ @BeforeClass(alwaysRun = true)
public static void setUpBeforeClass() throws Exception
{
}
/**
* @throws java.lang.Exception
*/
- @AfterClass
+ @AfterClass(alwaysRun = true)
public static void tearDownAfterClass() throws Exception
{
}
private void assertValidFormat(String fmt, String src, FileParse fp)
{
- AssertJUnit.assertTrue("Couldn't resolve " + src + " as a valid file", fp.isValid());
- String type = new IdentifyFile().Identify(fp);
+ AssertJUnit.assertTrue("Couldn't resolve " + src + " as a valid file",
+ fp.isValid());
+ String type = new IdentifyFile().identify(fp);
AssertJUnit.assertTrue("Data from '" + src + "' Expected to be '" + fmt
+ "' identified as '" + type + "'", type.equalsIgnoreCase(fmt));
}
- @Test
+ @Test(groups = { "Functional" })
public void testStarsInFasta1() throws IOException
{
String uri;
assertValidFormat("FASTA", uri, fp);
}
- @Test
+ @Test(groups = { "Functional" })
public void testStarsInFasta2() throws IOException
{
String uri;
assertValidFormat("FASTA", uri, fp);
}
- @Test
+ @Test(groups = { "Functional" })
public void testGzipIo() throws IOException
{
String uri;
assertValidFormat("FASTA", uri, fp);
}
- @Test
+ @Test(groups = { "Functional" })
public void testGziplocalFileIO() throws IOException
{
String filepath;
assertValidFormat("FASTA", filepath, fp);
}
- @Test
+ @Test(groups = { "Functional" })
public void testNonGzipURLIO() throws IOException
{
String uri;
assertValidFormat("FASTA", uri, fp);
}
- @Test
+ @Test(groups = { "Functional" })
public void testNonGziplocalFileIO() throws IOException
{
String filepath;