JAL-2349 JAL-3855 helper method to make it easy to transfer a single ‘reference annot...

[jalview.git] / test / jalview / io / FormatAdapterTest.java

diff --git a/test/jalview/io/FormatAdapterTest.java b/test/jalview/io/FormatAdapterTest.java
index 1cabc15..8f3ad2f 100644 (file)
--- a/test/jalview/io/FormatAdapterTest.java
+++ b/test/jalview/io/FormatAdapterTest.java
@@ -26,17 +26,26 @@ import static org.testng.AssertJUnit.fail;
 
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.SequenceI;
+import jalview.gui.JvOptionPane;
 
 import java.io.IOException;
 import java.util.ArrayList;
 import java.util.List;
 
+import org.testng.annotations.BeforeClass;
 import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
 public class FormatAdapterTest
 {
 
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
+
   /**
    * Test saving and re-reading in a specified format
    * 
@@ -76,15 +85,14 @@ public class FormatAdapterTest
          * special case: MSF always uses '.' as gap character
          */
         sequenceString = adjustForGapTreatment(sequenceString, gap, format);
-        assertEquals(
-                String.format("Sequence %d: %s", i, seqs[i].getName()),
+        assertEquals(String.format("Sequence %d: %s", i, seqs[i].getName()),
                 seqs[i].getSequenceAsString(), sequenceString);
         i++;
       }
     } catch (IOException e)
     {
-      fail(String
-              .format("Format %s failed with %s", format, e.getMessage()));
+      fail(String.format("Format %s failed with %s", format,
+              e.getMessage()));
     }
   }
 
@@ -123,7 +131,7 @@ public class FormatAdapterTest
   static Object[][] getFormats()
   {
     List<FileFormatI> both = new ArrayList<FileFormatI>();
-    for (FileFormat format : FileFormat.values())
+    for (FileFormatI format : FileFormats.getInstance().getFormats())
     {
       if (format.isReadable() && format.isWritable()
               && format.isTextFormat())