+ actualGrp.getColourText());
System.out.println(expectedGrp.getDisplayBoxes() + " | "
+ actualGrp.getDisplayBoxes());
- System.out.println(expectedGrp.isIgnoreGapsConsensus() + " | "
- + actualGrp.isIgnoreGapsConsensus());
+ System.out.println(expectedGrp.getIgnoreGapsConsensus() + " | "
+ + actualGrp.getIgnoreGapsConsensus());
System.out.println(expectedGrp.getSequences().size() + " | "
+ actualGrp.getSequences().size());
System.out.println(expectedGrp.getStartRes() + " | "
if (expectedGrp.getName().equals(actualGrp.getName())
&& expectedGrp.getColourText() == actualGrp.getColourText()
&& expectedGrp.getDisplayBoxes() == actualGrp.getDisplayBoxes()
- && expectedGrp.isIgnoreGapsConsensus() == actualGrp
- .isIgnoreGapsConsensus()
+ && expectedGrp.getIgnoreGapsConsensus() == actualGrp
+ .getIgnoreGapsConsensus()
&& colourSchemeMatches
&& expectedGrp.getSequences().size() == actualGrp
.getSequences().size()