import jalview.analysis.SequenceIdMatcher;
import jalview.analysis.TreeModel;
+import jalview.datamodel.BinaryNode;
import jalview.datamodel.SequenceI;
import jalview.datamodel.SequenceNode;
import jalview.gui.JvOptionPane;
stage + "Newick file is invalid ('"
+ nf_regen.getWarningMessage() + "')",
nf_regen.isValid());
- SequenceNode tree_regen = nf.getTree();
+ BinaryNode tree_regen = nf.getTree();
AssertJUnit.assertTrue(stage + "Null Tree", tree_regen != null);
stage = "Compare original and generated tree" + treename;